Gene : Bostr.12659s0042 B. stricta v1.2
Defline:  (1 of 2) PTHR23084//PTHR23084:SF136 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED Genomic Order:  42
Name:  ? Bostr.12659s0042 Secondary Identifier:  ? PAC:30652348
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6352 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0042 0.5kb upstream 0.5kb upstream 2473 true Scaffold12659: 236181-238653 Boechera stricta
Bostr.12659s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 238154-238653 Boechera stricta
Bostr.12659s0042 0.5kb downstream 0.5kb downstream 2473 true Scaffold12659: 235681-238153 Boechera stricta
Bostr.12659s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 235681-236180 Boechera stricta
Bostr.12659s0042 1.0kb upstream 1.0kb upstream 2973 true Scaffold12659: 236181-239153 Boechera stricta
Bostr.12659s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 238154-239153 Boechera stricta
Bostr.12659s0042 1.0kb downstream 1.0kb downstream 2973 true Scaffold12659: 235181-238153 Boechera stricta
Bostr.12659s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 235181-236180 Boechera stricta
Bostr.12659s0042 2.0kb upstream 2.0kb upstream 3973 true Scaffold12659: 236181-240153 Boechera stricta
Bostr.12659s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 238154-240153 Boechera stricta
Bostr.12659s0042 2.0kb downstream 2.0kb downstream 3973 true Scaffold12659: 234181-238153 Boechera stricta
Bostr.12659s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 234181-236180 Boechera stricta
Bostr.12659s0042 5.0kb upstream 5.0kb upstream 6973 true Scaffold12659: 236181-243153 Boechera stricta
Bostr.12659s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 238154-243153 Boechera stricta
Bostr.12659s0042 5.0kb downstream 5.0kb downstream 6973 true Scaffold12659: 231181-238153 Boechera stricta
Bostr.12659s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 231181-236180 Boechera stricta
Bostr.12659s0042 10.0kb upstream 10.0kb upstream 11973 true Scaffold12659: 236181-248153 Boechera stricta
Bostr.12659s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 238154-248153 Boechera stricta
Bostr.12659s0042 10.0kb downstream 10.0kb downstream 11973 true Scaffold12659: 226181-238153 Boechera stricta
Bostr.12659s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 226181-236180 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360269 5261 Brassicaceae View MSA
123839023 5264 Brassicales-Malvales View MSA
124337793 5266 SBM View MSA
124241055 5268 Malvidae View MSA
124062192 5270 Rosid View MSA
123740472 5271 Pentapetalae View MSA
122790939 5272 Eudicot View MSA
122046556 5273 Angiosperm View MSA
121350119 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain