Gene : Bostr.12659s0087 B. stricta v1.2
Defline:  (1 of 10) PF02892//PF05699//PF14372 - BED zinc finger (zf-BED) // hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) // Domain of unknown function (DUF4413) (DUF4413) Genomic Order:  87
Name:  ? Bostr.12659s0087 Secondary Identifier:  ? PAC:30652518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0087 0.5kb upstream 0.5kb upstream 4306 true Scaffold12659: 495886-500191 Boechera stricta
Bostr.12659s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 495886-496385 Boechera stricta
Bostr.12659s0087 0.5kb downstream 0.5kb downstream 4306 true Scaffold12659: 496386-500691 Boechera stricta
Bostr.12659s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 500192-500691 Boechera stricta
Bostr.12659s0087 1.0kb upstream 1.0kb upstream 4806 true Scaffold12659: 495386-500191 Boechera stricta
Bostr.12659s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 495386-496385 Boechera stricta
Bostr.12659s0087 1.0kb downstream 1.0kb downstream 4806 true Scaffold12659: 496386-501191 Boechera stricta
Bostr.12659s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 500192-501191 Boechera stricta
Bostr.12659s0087 2.0kb upstream 2.0kb upstream 5806 true Scaffold12659: 494386-500191 Boechera stricta
Bostr.12659s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 494386-496385 Boechera stricta
Bostr.12659s0087 2.0kb downstream 2.0kb downstream 5806 true Scaffold12659: 496386-502191 Boechera stricta
Bostr.12659s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 500192-502191 Boechera stricta
Bostr.12659s0087 5.0kb upstream 5.0kb upstream 8806 true Scaffold12659: 491386-500191 Boechera stricta
Bostr.12659s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 491386-496385 Boechera stricta
Bostr.12659s0087 5.0kb downstream 5.0kb downstream 8806 true Scaffold12659: 496386-505191 Boechera stricta
Bostr.12659s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 500192-505191 Boechera stricta
Bostr.12659s0087 10.0kb upstream 10.0kb upstream 13806 true Scaffold12659: 486386-500191 Boechera stricta
Bostr.12659s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 486386-496385 Boechera stricta
Bostr.12659s0087 10.0kb downstream 10.0kb downstream 13806 true Scaffold12659: 496386-510191 Boechera stricta
Bostr.12659s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 500192-510191 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380108 5261 Brassicaceae View MSA
123841078 5264 Brassicales-Malvales View MSA
124322837 5266 SBM View MSA
124248242 5268 Malvidae View MSA
124071055 5270 Rosid View MSA
123752994 5271 Pentapetalae View MSA
122797909 5272 Eudicot View MSA
122048190 5273 Angiosperm View MSA
121350578 5274 Embryophyte View MSA
123381805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain