Gene : Bostr.12659s0112 B. stricta v1.2

Defline:  (1 of 2) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  112
Name:  ? Bostr.12659s0112 Secondary Identifier:  ? PAC:30652185

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0112 0.5kb upstream 0.5kb upstream 2063 true Scaffold12659: 647742-649804 Boechera stricta
Bostr.12659s0112 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 649305-649804 Boechera stricta
Bostr.12659s0112 0.5kb downstream 0.5kb downstream 2063 true Scaffold12659: 647242-649304 Boechera stricta
Bostr.12659s0112 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 647242-647741 Boechera stricta
Bostr.12659s0112 1.0kb upstream 1.0kb upstream 2563 true Scaffold12659: 647742-650304 Boechera stricta
Bostr.12659s0112 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 649305-650304 Boechera stricta
Bostr.12659s0112 1.0kb downstream 1.0kb downstream 2563 true Scaffold12659: 646742-649304 Boechera stricta
Bostr.12659s0112 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 646742-647741 Boechera stricta
Bostr.12659s0112 2.0kb upstream 2.0kb upstream 3563 true Scaffold12659: 647742-651304 Boechera stricta
Bostr.12659s0112 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 649305-651304 Boechera stricta
Bostr.12659s0112 2.0kb downstream 2.0kb downstream 3563 true Scaffold12659: 645742-649304 Boechera stricta
Bostr.12659s0112 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 645742-647741 Boechera stricta
Bostr.12659s0112 5.0kb upstream 5.0kb upstream 6563 true Scaffold12659: 647742-654304 Boechera stricta
Bostr.12659s0112 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 649305-654304 Boechera stricta
Bostr.12659s0112 5.0kb downstream 5.0kb downstream 6563 true Scaffold12659: 642742-649304 Boechera stricta
Bostr.12659s0112 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 642742-647741 Boechera stricta
Bostr.12659s0112 10.0kb upstream 10.0kb upstream 11563 true Scaffold12659: 647742-659304 Boechera stricta
Bostr.12659s0112 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 649305-659304 Boechera stricta
Bostr.12659s0112 10.0kb downstream 10.0kb downstream 11563 true Scaffold12659: 637742-649304 Boechera stricta
Bostr.12659s0112 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 637742-647741 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361396 5261 Brassicaceae View MSA
123798154 5264 Brassicales-Malvales View MSA
124295828 5266 SBM View MSA
124148158 5268 Malvidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain