Gene : Bostr.12659s0001 B. stricta v1.2

Genomic Order:  1 Name:  ? Bostr.12659s0001
Secondary Identifier:  ? PAC:30652257

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0001 0.5kb upstream 0.5kb upstream 2394 true Scaffold12659: 6964-9357 Boechera stricta
Bostr.12659s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 6964-7463 Boechera stricta
Bostr.12659s0001 0.5kb downstream 0.5kb downstream 2394 true Scaffold12659: 7464-9857 Boechera stricta
Bostr.12659s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 9358-9857 Boechera stricta
Bostr.12659s0001 1.0kb upstream 1.0kb upstream 2894 true Scaffold12659: 6464-9357 Boechera stricta
Bostr.12659s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 6464-7463 Boechera stricta
Bostr.12659s0001 1.0kb downstream 1.0kb downstream 2894 true Scaffold12659: 7464-10357 Boechera stricta
Bostr.12659s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 9358-10357 Boechera stricta
Bostr.12659s0001 2.0kb upstream 2.0kb upstream 3894 true Scaffold12659: 5464-9357 Boechera stricta
Bostr.12659s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 5464-7463 Boechera stricta
Bostr.12659s0001 2.0kb downstream 2.0kb downstream 3894 true Scaffold12659: 7464-11357 Boechera stricta
Bostr.12659s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 9358-11357 Boechera stricta
Bostr.12659s0001 5.0kb upstream 5.0kb upstream 6894 true Scaffold12659: 2464-9357 Boechera stricta
Bostr.12659s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 2464-7463 Boechera stricta
Bostr.12659s0001 5.0kb downstream 5.0kb downstream 6894 true Scaffold12659: 7464-14357 Boechera stricta
Bostr.12659s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 9358-14357 Boechera stricta
Bostr.12659s0001 10.0kb upstream 10.0kb upstream 9357 true Scaffold12659: 1-9357 Boechera stricta
Bostr.12659s0001 10.0kb upstream 10.0kb upstream 7463 false Scaffold12659: 1-7463 Boechera stricta
Bostr.12659s0001 10.0kb downstream 10.0kb downstream 11894 true Scaffold12659: 7464-19357 Boechera stricta
Bostr.12659s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 9358-19357 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121500069 5273 Angiosperm Singleton cluster - no MSA
122339149 5261 Brassicaceae Singleton cluster - no MSA
123779656 5264 Brassicales-Malvales Singleton cluster - no MSA
124277974 5266 SBM Singleton cluster - no MSA
124133114 5268 Malvidae Singleton cluster - no MSA
123861336 5270 Rosid Singleton cluster - no MSA
123446885 5271 Pentapetalae Singleton cluster - no MSA
122482430 5272 Eudicot Singleton cluster - no MSA
120773399 5274 Embryophyte Singleton cluster - no MSA
122815716 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain