Gene : Bostr.13158s0299 B. stricta v1.2
Defline:  (1 of 1) PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  299
Name:  ? Bostr.13158s0299 Secondary Identifier:  ? PAC:30678573
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13158s0299 0.5kb upstream 0.5kb upstream 3160 true Scaffold13158: 1381758-1384917 Boechera stricta
Bostr.13158s0299 0.5kb upstream 0.5kb upstream 500 false Scaffold13158: 1381758-1382257 Boechera stricta
Bostr.13158s0299 0.5kb downstream 0.5kb downstream 3160 true Scaffold13158: 1382258-1385417 Boechera stricta
Bostr.13158s0299 0.5kb downstream 0.5kb downstream 500 false Scaffold13158: 1384918-1385417 Boechera stricta
Bostr.13158s0299 1.0kb upstream 1.0kb upstream 3660 true Scaffold13158: 1381258-1384917 Boechera stricta
Bostr.13158s0299 1.0kb upstream 1.0kb upstream 1000 false Scaffold13158: 1381258-1382257 Boechera stricta
Bostr.13158s0299 1.0kb downstream 1.0kb downstream 3660 true Scaffold13158: 1382258-1385917 Boechera stricta
Bostr.13158s0299 1.0kb downstream 1.0kb downstream 1000 false Scaffold13158: 1384918-1385917 Boechera stricta
Bostr.13158s0299 2.0kb upstream 2.0kb upstream 4660 true Scaffold13158: 1380258-1384917 Boechera stricta
Bostr.13158s0299 2.0kb upstream 2.0kb upstream 2000 false Scaffold13158: 1380258-1382257 Boechera stricta
Bostr.13158s0299 2.0kb downstream 2.0kb downstream 4660 true Scaffold13158: 1382258-1386917 Boechera stricta
Bostr.13158s0299 2.0kb downstream 2.0kb downstream 2000 false Scaffold13158: 1384918-1386917 Boechera stricta
Bostr.13158s0299 5.0kb upstream 5.0kb upstream 7660 true Scaffold13158: 1377258-1384917 Boechera stricta
Bostr.13158s0299 5.0kb upstream 5.0kb upstream 5000 false Scaffold13158: 1377258-1382257 Boechera stricta
Bostr.13158s0299 5.0kb downstream 5.0kb downstream 7660 true Scaffold13158: 1382258-1389917 Boechera stricta
Bostr.13158s0299 5.0kb downstream 5.0kb downstream 5000 false Scaffold13158: 1384918-1389917 Boechera stricta
Bostr.13158s0299 10.0kb upstream 10.0kb upstream 12660 true Scaffold13158: 1372258-1384917 Boechera stricta
Bostr.13158s0299 10.0kb upstream 10.0kb upstream 10000 false Scaffold13158: 1372258-1382257 Boechera stricta
Bostr.13158s0299 10.0kb downstream 10.0kb downstream 12660 true Scaffold13158: 1382258-1394917 Boechera stricta
Bostr.13158s0299 10.0kb downstream 10.0kb downstream 10000 false Scaffold13158: 1384918-1394917 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370745 5261 Brassicaceae View MSA
123831380 5264 Brassicales-Malvales View MSA
124321725 5266 SBM View MSA
124239052 5268 Malvidae View MSA
124050337 5270 Rosid View MSA
123740873 5271 Pentapetalae View MSA
122769993 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain