Gene : Bostr.13158s0143 B. stricta v1.2
Defline:  (1 of 1) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  143
Name:  ? Bostr.13158s0143 Secondary Identifier:  ? PAC:30678602
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13158s0143 0.5kb upstream 0.5kb upstream 2045 true Scaffold13158: 659349-661393 Boechera stricta
Bostr.13158s0143 0.5kb upstream 0.5kb upstream 500 false Scaffold13158: 659349-659848 Boechera stricta
Bostr.13158s0143 0.5kb downstream 0.5kb downstream 2045 true Scaffold13158: 659849-661893 Boechera stricta
Bostr.13158s0143 0.5kb downstream 0.5kb downstream 500 false Scaffold13158: 661394-661893 Boechera stricta
Bostr.13158s0143 1.0kb upstream 1.0kb upstream 2545 true Scaffold13158: 658849-661393 Boechera stricta
Bostr.13158s0143 1.0kb upstream 1.0kb upstream 1000 false Scaffold13158: 658849-659848 Boechera stricta
Bostr.13158s0143 1.0kb downstream 1.0kb downstream 2545 true Scaffold13158: 659849-662393 Boechera stricta
Bostr.13158s0143 1.0kb downstream 1.0kb downstream 1000 false Scaffold13158: 661394-662393 Boechera stricta
Bostr.13158s0143 2.0kb upstream 2.0kb upstream 3545 true Scaffold13158: 657849-661393 Boechera stricta
Bostr.13158s0143 2.0kb upstream 2.0kb upstream 2000 false Scaffold13158: 657849-659848 Boechera stricta
Bostr.13158s0143 2.0kb downstream 2.0kb downstream 3545 true Scaffold13158: 659849-663393 Boechera stricta
Bostr.13158s0143 2.0kb downstream 2.0kb downstream 2000 false Scaffold13158: 661394-663393 Boechera stricta
Bostr.13158s0143 5.0kb upstream 5.0kb upstream 6545 true Scaffold13158: 654849-661393 Boechera stricta
Bostr.13158s0143 5.0kb upstream 5.0kb upstream 5000 false Scaffold13158: 654849-659848 Boechera stricta
Bostr.13158s0143 5.0kb downstream 5.0kb downstream 6545 true Scaffold13158: 659849-666393 Boechera stricta
Bostr.13158s0143 5.0kb downstream 5.0kb downstream 5000 false Scaffold13158: 661394-666393 Boechera stricta
Bostr.13158s0143 10.0kb upstream 10.0kb upstream 11545 true Scaffold13158: 649849-661393 Boechera stricta
Bostr.13158s0143 10.0kb upstream 10.0kb upstream 10000 false Scaffold13158: 649849-659848 Boechera stricta
Bostr.13158s0143 10.0kb downstream 10.0kb downstream 11545 true Scaffold13158: 659849-671393 Boechera stricta
Bostr.13158s0143 10.0kb downstream 10.0kb downstream 10000 false Scaffold13158: 661394-671393 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368776 5261 Brassicaceae View MSA
123840069 5264 Brassicales-Malvales View MSA
124341873 5266 SBM View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain