Gene : Bostr.13129s0476 B. stricta v1.2

Defline:  (1 of 2) PTHR24349:SF161 - CALCIUM-DEPENDENT PROTEIN KINASE 1-RELATED Genomic Order:  476
Name:  ? Bostr.13129s0476 Secondary Identifier:  ? PAC:30673219

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0476 0.5kb upstream 0.5kb upstream 4391 true Scaffold13129: 2201222-2205612 Boechera stricta
Bostr.13129s0476 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 2201222-2201721 Boechera stricta
Bostr.13129s0476 0.5kb downstream 0.5kb downstream 4391 true Scaffold13129: 2201722-2206112 Boechera stricta
Bostr.13129s0476 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 2205613-2206112 Boechera stricta
Bostr.13129s0476 1.0kb upstream 1.0kb upstream 4891 true Scaffold13129: 2200722-2205612 Boechera stricta
Bostr.13129s0476 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 2200722-2201721 Boechera stricta
Bostr.13129s0476 1.0kb downstream 1.0kb downstream 4891 true Scaffold13129: 2201722-2206612 Boechera stricta
Bostr.13129s0476 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 2205613-2206612 Boechera stricta
Bostr.13129s0476 2.0kb upstream 2.0kb upstream 5891 true Scaffold13129: 2199722-2205612 Boechera stricta
Bostr.13129s0476 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 2199722-2201721 Boechera stricta
Bostr.13129s0476 2.0kb downstream 2.0kb downstream 5891 true Scaffold13129: 2201722-2207612 Boechera stricta
Bostr.13129s0476 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 2205613-2207612 Boechera stricta
Bostr.13129s0476 5.0kb upstream 5.0kb upstream 8891 true Scaffold13129: 2196722-2205612 Boechera stricta
Bostr.13129s0476 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 2196722-2201721 Boechera stricta
Bostr.13129s0476 5.0kb downstream 5.0kb downstream 8891 true Scaffold13129: 2201722-2210612 Boechera stricta
Bostr.13129s0476 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 2205613-2210612 Boechera stricta
Bostr.13129s0476 10.0kb upstream 10.0kb upstream 13891 true Scaffold13129: 2191722-2205612 Boechera stricta
Bostr.13129s0476 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 2191722-2201721 Boechera stricta
Bostr.13129s0476 10.0kb downstream 10.0kb downstream 13891 true Scaffold13129: 2201722-2215612 Boechera stricta
Bostr.13129s0476 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 2205613-2215612 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377435 5261 Brassicaceae View MSA
123837639 5264 Brassicales-Malvales View MSA
124341307 5266 SBM View MSA
124237354 5268 Malvidae View MSA
124072491 5270 Rosid View MSA
123744459 5271 Pentapetalae View MSA
122794301 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain