Gene : Bostr.13129s0400 B. stricta v1.2
Defline:  (1 of 1) PTHR11236:SF20 - ANTHRANILATE SYNTHASE COMPONENT I-LIKE PROTEIN Genomic Order:  400
Name:  ? Bostr.13129s0400 Secondary Identifier:  ? PAC:30672978
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRPSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0400 0.5kb upstream 0.5kb upstream 3865 true Scaffold13129: 1856855-1860719 Boechera stricta
Bostr.13129s0400 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 1856855-1857354 Boechera stricta
Bostr.13129s0400 0.5kb downstream 0.5kb downstream 3865 true Scaffold13129: 1857355-1861219 Boechera stricta
Bostr.13129s0400 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1860720-1861219 Boechera stricta
Bostr.13129s0400 1.0kb upstream 1.0kb upstream 4365 true Scaffold13129: 1856355-1860719 Boechera stricta
Bostr.13129s0400 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 1856355-1857354 Boechera stricta
Bostr.13129s0400 1.0kb downstream 1.0kb downstream 4365 true Scaffold13129: 1857355-1861719 Boechera stricta
Bostr.13129s0400 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1860720-1861719 Boechera stricta
Bostr.13129s0400 2.0kb upstream 2.0kb upstream 5365 true Scaffold13129: 1855355-1860719 Boechera stricta
Bostr.13129s0400 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 1855355-1857354 Boechera stricta
Bostr.13129s0400 2.0kb downstream 2.0kb downstream 5365 true Scaffold13129: 1857355-1862719 Boechera stricta
Bostr.13129s0400 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1860720-1862719 Boechera stricta
Bostr.13129s0400 5.0kb upstream 5.0kb upstream 8365 true Scaffold13129: 1852355-1860719 Boechera stricta
Bostr.13129s0400 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 1852355-1857354 Boechera stricta
Bostr.13129s0400 5.0kb downstream 5.0kb downstream 8365 true Scaffold13129: 1857355-1865719 Boechera stricta
Bostr.13129s0400 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 1860720-1865719 Boechera stricta
Bostr.13129s0400 10.0kb upstream 10.0kb upstream 13365 true Scaffold13129: 1847355-1860719 Boechera stricta
Bostr.13129s0400 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 1847355-1857354 Boechera stricta
Bostr.13129s0400 10.0kb downstream 10.0kb downstream 13365 true Scaffold13129: 1857355-1870719 Boechera stricta
Bostr.13129s0400 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 1860720-1870719 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365432 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain