Gene : Bostr.13129s0408 B. stricta v1.2
Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  408
Name:  ? Bostr.13129s0408 Secondary Identifier:  ? PAC:30673175
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5695 Boechera stricta pathologic  
Bstricta PWY-6608 Boechera stricta pathologic  
Bstricta PWY-6609 Boechera stricta pathologic  
Bstricta PWY-7179 Boechera stricta pathologic  
Bstricta SALVADEHYPOX-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0408 0.5kb upstream 0.5kb upstream 3508 true Scaffold13129: 1901380-1904887 Boechera stricta
Bostr.13129s0408 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 1904388-1904887 Boechera stricta
Bostr.13129s0408 0.5kb downstream 0.5kb downstream 3508 true Scaffold13129: 1900880-1904387 Boechera stricta
Bostr.13129s0408 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1900880-1901379 Boechera stricta
Bostr.13129s0408 1.0kb upstream 1.0kb upstream 4008 true Scaffold13129: 1901380-1905387 Boechera stricta
Bostr.13129s0408 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 1904388-1905387 Boechera stricta
Bostr.13129s0408 1.0kb downstream 1.0kb downstream 4008 true Scaffold13129: 1900380-1904387 Boechera stricta
Bostr.13129s0408 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1900380-1901379 Boechera stricta
Bostr.13129s0408 2.0kb upstream 2.0kb upstream 5008 true Scaffold13129: 1901380-1906387 Boechera stricta
Bostr.13129s0408 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 1904388-1906387 Boechera stricta
Bostr.13129s0408 2.0kb downstream 2.0kb downstream 5008 true Scaffold13129: 1899380-1904387 Boechera stricta
Bostr.13129s0408 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1899380-1901379 Boechera stricta
Bostr.13129s0408 5.0kb upstream 5.0kb upstream 8008 true Scaffold13129: 1901380-1909387 Boechera stricta
Bostr.13129s0408 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 1904388-1909387 Boechera stricta
Bostr.13129s0408 5.0kb downstream 5.0kb downstream 8008 true Scaffold13129: 1896380-1904387 Boechera stricta
Bostr.13129s0408 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 1896380-1901379 Boechera stricta
Bostr.13129s0408 10.0kb upstream 10.0kb upstream 13008 true Scaffold13129: 1901380-1914387 Boechera stricta
Bostr.13129s0408 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 1904388-1914387 Boechera stricta
Bostr.13129s0408 10.0kb downstream 10.0kb downstream 13008 true Scaffold13129: 1891380-1904387 Boechera stricta
Bostr.13129s0408 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 1891380-1901379 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain