Gene : Bostr.13129s0424 B. stricta v1.2
Defline:  (1 of 2) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  424
Name:  ? Bostr.13129s0424 Secondary Identifier:  ? PAC:30673037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0424 0.5kb upstream 0.5kb upstream 2987 true Scaffold13129: 2000145-2003131 Boechera stricta
Bostr.13129s0424 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 2002632-2003131 Boechera stricta
Bostr.13129s0424 0.5kb downstream 0.5kb downstream 2987 true Scaffold13129: 1999645-2002631 Boechera stricta
Bostr.13129s0424 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1999645-2000144 Boechera stricta
Bostr.13129s0424 1.0kb upstream 1.0kb upstream 3487 true Scaffold13129: 2000145-2003631 Boechera stricta
Bostr.13129s0424 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 2002632-2003631 Boechera stricta
Bostr.13129s0424 1.0kb downstream 1.0kb downstream 3487 true Scaffold13129: 1999145-2002631 Boechera stricta
Bostr.13129s0424 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1999145-2000144 Boechera stricta
Bostr.13129s0424 2.0kb upstream 2.0kb upstream 4487 true Scaffold13129: 2000145-2004631 Boechera stricta
Bostr.13129s0424 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 2002632-2004631 Boechera stricta
Bostr.13129s0424 2.0kb downstream 2.0kb downstream 4487 true Scaffold13129: 1998145-2002631 Boechera stricta
Bostr.13129s0424 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1998145-2000144 Boechera stricta
Bostr.13129s0424 5.0kb upstream 5.0kb upstream 7487 true Scaffold13129: 2000145-2007631 Boechera stricta
Bostr.13129s0424 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 2002632-2007631 Boechera stricta
Bostr.13129s0424 5.0kb downstream 5.0kb downstream 7487 true Scaffold13129: 1995145-2002631 Boechera stricta
Bostr.13129s0424 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 1995145-2000144 Boechera stricta
Bostr.13129s0424 10.0kb upstream 10.0kb upstream 12487 true Scaffold13129: 2000145-2012631 Boechera stricta
Bostr.13129s0424 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 2002632-2012631 Boechera stricta
Bostr.13129s0424 10.0kb downstream 10.0kb downstream 12487 true Scaffold13129: 1990145-2002631 Boechera stricta
Bostr.13129s0424 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 1990145-2000144 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375809 5261 Brassicaceae View MSA
123837056 5264 Brassicales-Malvales View MSA
124338843 5266 SBM View MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain