Gene : Bostr.13129s0221 B. stricta v1.2
Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  221
Name:  ? Bostr.13129s0221 Secondary Identifier:  ? PAC:30672967
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGININE-SYN4-PWY Boechera stricta pathologic  
Bstricta GLUDEG-I-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0221 0.5kb upstream 0.5kb upstream 2773 true Scaffold13129: 1003422-1006194 Boechera stricta
Bostr.13129s0221 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 1005695-1006194 Boechera stricta
Bostr.13129s0221 0.5kb downstream 0.5kb downstream 2773 true Scaffold13129: 1002922-1005694 Boechera stricta
Bostr.13129s0221 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 1002922-1003421 Boechera stricta
Bostr.13129s0221 1.0kb upstream 1.0kb upstream 3273 true Scaffold13129: 1003422-1006694 Boechera stricta
Bostr.13129s0221 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 1005695-1006694 Boechera stricta
Bostr.13129s0221 1.0kb downstream 1.0kb downstream 3273 true Scaffold13129: 1002422-1005694 Boechera stricta
Bostr.13129s0221 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 1002422-1003421 Boechera stricta
Bostr.13129s0221 2.0kb upstream 2.0kb upstream 4273 true Scaffold13129: 1003422-1007694 Boechera stricta
Bostr.13129s0221 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 1005695-1007694 Boechera stricta
Bostr.13129s0221 2.0kb downstream 2.0kb downstream 4273 true Scaffold13129: 1001422-1005694 Boechera stricta
Bostr.13129s0221 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 1001422-1003421 Boechera stricta
Bostr.13129s0221 5.0kb upstream 5.0kb upstream 7273 true Scaffold13129: 1003422-1010694 Boechera stricta
Bostr.13129s0221 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 1005695-1010694 Boechera stricta
Bostr.13129s0221 5.0kb downstream 5.0kb downstream 7273 true Scaffold13129: 998422-1005694 Boechera stricta
Bostr.13129s0221 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 998422-1003421 Boechera stricta
Bostr.13129s0221 10.0kb upstream 10.0kb upstream 12273 true Scaffold13129: 1003422-1015694 Boechera stricta
Bostr.13129s0221 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 1005695-1015694 Boechera stricta
Bostr.13129s0221 10.0kb downstream 10.0kb downstream 12273 true Scaffold13129: 993422-1005694 Boechera stricta
Bostr.13129s0221 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 993422-1003421 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381048 5261 Brassicaceae View MSA
123840099 5264 Brassicales-Malvales View MSA
124351160 5266 SBM View MSA
124247496 5268 Malvidae View MSA
124068795 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain