Gene : Bostr.15654s0024 B. stricta v1.2
Defline:  (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  24
Name:  ? Bostr.15654s0024 Secondary Identifier:  ? PAC:30680345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15654s0024 0.5kb upstream 0.5kb upstream 3340 true Scaffold15654: 96990-100329 Boechera stricta
Bostr.15654s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold15654: 99830-100329 Boechera stricta
Bostr.15654s0024 0.5kb downstream 0.5kb downstream 3340 true Scaffold15654: 96490-99829 Boechera stricta
Bostr.15654s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold15654: 96490-96989 Boechera stricta
Bostr.15654s0024 1.0kb upstream 1.0kb upstream 3840 true Scaffold15654: 96990-100829 Boechera stricta
Bostr.15654s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold15654: 99830-100829 Boechera stricta
Bostr.15654s0024 1.0kb downstream 1.0kb downstream 3840 true Scaffold15654: 95990-99829 Boechera stricta
Bostr.15654s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold15654: 95990-96989 Boechera stricta
Bostr.15654s0024 2.0kb upstream 2.0kb upstream 4840 true Scaffold15654: 96990-101829 Boechera stricta
Bostr.15654s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold15654: 99830-101829 Boechera stricta
Bostr.15654s0024 2.0kb downstream 2.0kb downstream 4840 true Scaffold15654: 94990-99829 Boechera stricta
Bostr.15654s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold15654: 94990-96989 Boechera stricta
Bostr.15654s0024 5.0kb upstream 5.0kb upstream 7840 true Scaffold15654: 96990-104829 Boechera stricta
Bostr.15654s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold15654: 99830-104829 Boechera stricta
Bostr.15654s0024 5.0kb downstream 5.0kb downstream 7840 true Scaffold15654: 91990-99829 Boechera stricta
Bostr.15654s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold15654: 91990-96989 Boechera stricta
Bostr.15654s0024 10.0kb upstream 10.0kb upstream 12840 true Scaffold15654: 96990-109829 Boechera stricta
Bostr.15654s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold15654: 99830-109829 Boechera stricta
Bostr.15654s0024 10.0kb downstream 10.0kb downstream 12840 true Scaffold15654: 86990-99829 Boechera stricta
Bostr.15654s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold15654: 86990-96989 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372611 5261 Brassicaceae View MSA
123835792 5264 Brassicales-Malvales View MSA
124337988 5266 SBM View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain