Gene : Bostr.14452s0004 B. stricta v1.2
Defline:  (1 of 2) PTHR11403 - CYTOCHROME C OXIDASE SUBUNIT III Genomic Order:  4
Name:  ? Bostr.14452s0004 Secondary Identifier:  ? PAC:30664608
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14452s0004 0.5kb upstream 0.5kb upstream 893 true Scaffold14452: 8715-9607 Boechera stricta
Bostr.14452s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold14452: 8715-9214 Boechera stricta
Bostr.14452s0004 0.5kb downstream 0.5kb downstream 893 true Scaffold14452: 9215-10107 Boechera stricta
Bostr.14452s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold14452: 9608-10107 Boechera stricta
Bostr.14452s0004 1.0kb upstream 1.0kb upstream 1393 true Scaffold14452: 8215-9607 Boechera stricta
Bostr.14452s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold14452: 8215-9214 Boechera stricta
Bostr.14452s0004 1.0kb downstream 1.0kb downstream 1393 true Scaffold14452: 9215-10607 Boechera stricta
Bostr.14452s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold14452: 9608-10607 Boechera stricta
Bostr.14452s0004 2.0kb upstream 2.0kb upstream 2393 true Scaffold14452: 7215-9607 Boechera stricta
Bostr.14452s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold14452: 7215-9214 Boechera stricta
Bostr.14452s0004 2.0kb downstream 2.0kb downstream 2393 true Scaffold14452: 9215-11607 Boechera stricta
Bostr.14452s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold14452: 9608-11607 Boechera stricta
Bostr.14452s0004 5.0kb upstream 5.0kb upstream 5393 true Scaffold14452: 4215-9607 Boechera stricta
Bostr.14452s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold14452: 4215-9214 Boechera stricta
Bostr.14452s0004 5.0kb downstream 5.0kb downstream 5393 true Scaffold14452: 9215-14607 Boechera stricta
Bostr.14452s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold14452: 9608-14607 Boechera stricta
Bostr.14452s0004 10.0kb upstream 10.0kb upstream 9607 true Scaffold14452: 1-9607 Boechera stricta
Bostr.14452s0004 10.0kb upstream 10.0kb upstream 9214 false Scaffold14452: 1-9214 Boechera stricta
Bostr.14452s0004 10.0kb downstream 10.0kb downstream 5939 true Scaffold14452: 9215-15153 Boechera stricta
Bostr.14452s0004 10.0kb downstream 10.0kb downstream 5546 false Scaffold14452: 9608-15153 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657382 5273 Angiosperm View MSA
122340743 5261 Brassicaceae Singleton cluster - no MSA
123781169 5264 Brassicales-Malvales Singleton cluster - no MSA
124279461 5266 SBM Singleton cluster - no MSA
124134416 5268 Malvidae Singleton cluster - no MSA
124039121 5270 Rosid View MSA
123611155 5271 Pentapetalae View MSA
122645730 5272 Eudicot View MSA
120929424 5274 Embryophyte View MSA
122969985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain