Gene : Bostr.14496s0001 B. stricta v1.2

Defline:  (1 of 1) PTHR24012:SF411 - EXPRESSED PROTEIN Genomic Order:  1
Name:  ? Bostr.14496s0001 Secondary Identifier:  ? PAC:30665440

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.14496s0001 0.5kb upstream 0.5kb upstream 3256 true Scaffold14496: 1-3256 Boechera stricta
Bostr.14496s0001 0.5kb upstream 0.5kb upstream 12 false Scaffold14496: 1-12 Boechera stricta
Bostr.14496s0001 0.5kb downstream 0.5kb downstream 3246 true Scaffold14496: 13-3258 Boechera stricta
Bostr.14496s0001 0.5kb downstream 0.5kb downstream 2 false Scaffold14496: 3257-3258 Boechera stricta
Bostr.14496s0001 1.0kb upstream 1.0kb upstream 3256 true Scaffold14496: 1-3256 Boechera stricta
Bostr.14496s0001 1.0kb upstream 1.0kb upstream 12 false Scaffold14496: 1-12 Boechera stricta
Bostr.14496s0001 1.0kb downstream 1.0kb downstream 3246 true Scaffold14496: 13-3258 Boechera stricta
Bostr.14496s0001 1.0kb downstream 1.0kb downstream 2 false Scaffold14496: 3257-3258 Boechera stricta
Bostr.14496s0001 2.0kb upstream 2.0kb upstream 3256 true Scaffold14496: 1-3256 Boechera stricta
Bostr.14496s0001 2.0kb upstream 2.0kb upstream 12 false Scaffold14496: 1-12 Boechera stricta
Bostr.14496s0001 2.0kb downstream 2.0kb downstream 3246 true Scaffold14496: 13-3258 Boechera stricta
Bostr.14496s0001 2.0kb downstream 2.0kb downstream 2 false Scaffold14496: 3257-3258 Boechera stricta
Bostr.14496s0001 5.0kb upstream 5.0kb upstream 3256 true Scaffold14496: 1-3256 Boechera stricta
Bostr.14496s0001 5.0kb upstream 5.0kb upstream 12 false Scaffold14496: 1-12 Boechera stricta
Bostr.14496s0001 5.0kb downstream 5.0kb downstream 3246 true Scaffold14496: 13-3258 Boechera stricta
Bostr.14496s0001 5.0kb downstream 5.0kb downstream 2 false Scaffold14496: 3257-3258 Boechera stricta
Bostr.14496s0001 10.0kb upstream 10.0kb upstream 3256 true Scaffold14496: 1-3256 Boechera stricta
Bostr.14496s0001 10.0kb upstream 10.0kb upstream 12 false Scaffold14496: 1-12 Boechera stricta
Bostr.14496s0001 10.0kb downstream 10.0kb downstream 3246 true Scaffold14496: 13-3258 Boechera stricta
Bostr.14496s0001 10.0kb downstream 10.0kb downstream 2 false Scaffold14496: 3257-3258 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122340847 5261 Brassicaceae Singleton cluster - no MSA
123781271 5264 Brassicales-Malvales Singleton cluster - no MSA
124279561 5266 SBM Singleton cluster - no MSA
124134505 5268 Malvidae Singleton cluster - no MSA
124062654 5270 Rosid View MSA
123744051 5271 Pentapetalae View MSA
122793233 5272 Eudicot View MSA
122049270 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain