Gene : Bostr.13671s0366 B. stricta v1.2

Defline:  (1 of 2) KOG3454 - U1 snRNP-specific protein C Genomic Order:  366
Name:  ? Bostr.13671s0366 Secondary Identifier:  ? PAC:30670592

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0366 0.5kb upstream 0.5kb upstream 4153 true Scaffold13671: 1943637-1947789 Boechera stricta
Bostr.13671s0366 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 1943637-1944136 Boechera stricta
Bostr.13671s0366 0.5kb downstream 0.5kb downstream 4153 true Scaffold13671: 1944137-1948289 Boechera stricta
Bostr.13671s0366 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 1947790-1948289 Boechera stricta
Bostr.13671s0366 1.0kb upstream 1.0kb upstream 4653 true Scaffold13671: 1943137-1947789 Boechera stricta
Bostr.13671s0366 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 1943137-1944136 Boechera stricta
Bostr.13671s0366 1.0kb downstream 1.0kb downstream 4653 true Scaffold13671: 1944137-1948789 Boechera stricta
Bostr.13671s0366 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 1947790-1948789 Boechera stricta
Bostr.13671s0366 2.0kb upstream 2.0kb upstream 5653 true Scaffold13671: 1942137-1947789 Boechera stricta
Bostr.13671s0366 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 1942137-1944136 Boechera stricta
Bostr.13671s0366 2.0kb downstream 2.0kb downstream 5653 true Scaffold13671: 1944137-1949789 Boechera stricta
Bostr.13671s0366 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 1947790-1949789 Boechera stricta
Bostr.13671s0366 5.0kb upstream 5.0kb upstream 8653 true Scaffold13671: 1939137-1947789 Boechera stricta
Bostr.13671s0366 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 1939137-1944136 Boechera stricta
Bostr.13671s0366 5.0kb downstream 5.0kb downstream 8653 true Scaffold13671: 1944137-1952789 Boechera stricta
Bostr.13671s0366 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 1947790-1952789 Boechera stricta
Bostr.13671s0366 10.0kb upstream 10.0kb upstream 13653 true Scaffold13671: 1934137-1947789 Boechera stricta
Bostr.13671s0366 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 1934137-1944136 Boechera stricta
Bostr.13671s0366 10.0kb downstream 10.0kb downstream 13653 true Scaffold13671: 1944137-1957789 Boechera stricta
Bostr.13671s0366 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 1947790-1957789 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366800 5261 Brassicaceae View MSA
123799245 5264 Brassicales-Malvales View MSA
124296790 5266 SBM View MSA
124253524 5268 Malvidae View MSA
124069520 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain