Gene : Bostr.13671s0412 B. stricta v1.2
Defline:  (1 of 5) 2.3.3.8 - ATP citrate synthase / Citric cleavage enzyme Genomic Order:  412
Name:  ? Bostr.13671s0412 Secondary Identifier:  ? PAC:30670439
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5172 Boechera stricta pathologic  
Bstricta PWY-5173 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0412 0.5kb upstream 0.5kb upstream 3076 true Scaffold13671: 2215422-2218497 Boechera stricta
Bostr.13671s0412 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 2217998-2218497 Boechera stricta
Bostr.13671s0412 0.5kb downstream 0.5kb downstream 3076 true Scaffold13671: 2214922-2217997 Boechera stricta
Bostr.13671s0412 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 2214922-2215421 Boechera stricta
Bostr.13671s0412 1.0kb upstream 1.0kb upstream 3576 true Scaffold13671: 2215422-2218997 Boechera stricta
Bostr.13671s0412 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 2217998-2218997 Boechera stricta
Bostr.13671s0412 1.0kb downstream 1.0kb downstream 3576 true Scaffold13671: 2214422-2217997 Boechera stricta
Bostr.13671s0412 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 2214422-2215421 Boechera stricta
Bostr.13671s0412 2.0kb upstream 2.0kb upstream 4576 true Scaffold13671: 2215422-2219997 Boechera stricta
Bostr.13671s0412 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 2217998-2219997 Boechera stricta
Bostr.13671s0412 2.0kb downstream 2.0kb downstream 4576 true Scaffold13671: 2213422-2217997 Boechera stricta
Bostr.13671s0412 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 2213422-2215421 Boechera stricta
Bostr.13671s0412 5.0kb upstream 5.0kb upstream 7576 true Scaffold13671: 2215422-2222997 Boechera stricta
Bostr.13671s0412 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 2217998-2222997 Boechera stricta
Bostr.13671s0412 5.0kb downstream 5.0kb downstream 7576 true Scaffold13671: 2210422-2217997 Boechera stricta
Bostr.13671s0412 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 2210422-2215421 Boechera stricta
Bostr.13671s0412 10.0kb upstream 10.0kb upstream 12576 true Scaffold13671: 2215422-2227997 Boechera stricta
Bostr.13671s0412 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 2217998-2227997 Boechera stricta
Bostr.13671s0412 10.0kb downstream 10.0kb downstream 12576 true Scaffold13671: 2205422-2217997 Boechera stricta
Bostr.13671s0412 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 2205422-2215421 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380103 5261 Brassicaceae View MSA
123833458 5264 Brassicales-Malvales View MSA
124340760 5266 SBM View MSA
124252936 5268 Malvidae View MSA
124066765 5270 Rosid View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain