Gene : Bostr.13671s0408 B. stricta v1.2
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  408
Name:  ? Bostr.13671s0408 Secondary Identifier:  ? PAC:30670183
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY0-662 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0408 0.5kb upstream 0.5kb upstream 2916 true Scaffold13671: 2196456-2199371 Boechera stricta
Bostr.13671s0408 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 2198872-2199371 Boechera stricta
Bostr.13671s0408 0.5kb downstream 0.5kb downstream 2916 true Scaffold13671: 2195956-2198871 Boechera stricta
Bostr.13671s0408 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 2195956-2196455 Boechera stricta
Bostr.13671s0408 1.0kb upstream 1.0kb upstream 3416 true Scaffold13671: 2196456-2199871 Boechera stricta
Bostr.13671s0408 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 2198872-2199871 Boechera stricta
Bostr.13671s0408 1.0kb downstream 1.0kb downstream 3416 true Scaffold13671: 2195456-2198871 Boechera stricta
Bostr.13671s0408 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 2195456-2196455 Boechera stricta
Bostr.13671s0408 2.0kb upstream 2.0kb upstream 4416 true Scaffold13671: 2196456-2200871 Boechera stricta
Bostr.13671s0408 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 2198872-2200871 Boechera stricta
Bostr.13671s0408 2.0kb downstream 2.0kb downstream 4416 true Scaffold13671: 2194456-2198871 Boechera stricta
Bostr.13671s0408 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 2194456-2196455 Boechera stricta
Bostr.13671s0408 5.0kb upstream 5.0kb upstream 7416 true Scaffold13671: 2196456-2203871 Boechera stricta
Bostr.13671s0408 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 2198872-2203871 Boechera stricta
Bostr.13671s0408 5.0kb downstream 5.0kb downstream 7416 true Scaffold13671: 2191456-2198871 Boechera stricta
Bostr.13671s0408 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 2191456-2196455 Boechera stricta
Bostr.13671s0408 10.0kb upstream 10.0kb upstream 12416 true Scaffold13671: 2196456-2208871 Boechera stricta
Bostr.13671s0408 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 2198872-2208871 Boechera stricta
Bostr.13671s0408 10.0kb downstream 10.0kb downstream 12416 true Scaffold13671: 2186456-2198871 Boechera stricta
Bostr.13671s0408 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 2186456-2196455 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373386 5261 Brassicaceae View MSA
123833850 5264 Brassicales-Malvales View MSA
124338724 5266 SBM View MSA
124238778 5268 Malvidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain