Gene : Bostr.13671s0416 B. stricta v1.2
Defline:  (1 of 2) PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  416
Name:  ? Bostr.13671s0416 Secondary Identifier:  ? PAC:30670650
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0416 0.5kb upstream 0.5kb upstream 3143 true Scaffold13671: 2239376-2242518 Boechera stricta
Bostr.13671s0416 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 2239376-2239875 Boechera stricta
Bostr.13671s0416 0.5kb downstream 0.5kb downstream 3143 true Scaffold13671: 2239876-2243018 Boechera stricta
Bostr.13671s0416 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 2242519-2243018 Boechera stricta
Bostr.13671s0416 1.0kb upstream 1.0kb upstream 3643 true Scaffold13671: 2238876-2242518 Boechera stricta
Bostr.13671s0416 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 2238876-2239875 Boechera stricta
Bostr.13671s0416 1.0kb downstream 1.0kb downstream 3643 true Scaffold13671: 2239876-2243518 Boechera stricta
Bostr.13671s0416 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 2242519-2243518 Boechera stricta
Bostr.13671s0416 2.0kb upstream 2.0kb upstream 4643 true Scaffold13671: 2237876-2242518 Boechera stricta
Bostr.13671s0416 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 2237876-2239875 Boechera stricta
Bostr.13671s0416 2.0kb downstream 2.0kb downstream 4643 true Scaffold13671: 2239876-2244518 Boechera stricta
Bostr.13671s0416 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 2242519-2244518 Boechera stricta
Bostr.13671s0416 5.0kb upstream 5.0kb upstream 7643 true Scaffold13671: 2234876-2242518 Boechera stricta
Bostr.13671s0416 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 2234876-2239875 Boechera stricta
Bostr.13671s0416 5.0kb downstream 5.0kb downstream 7643 true Scaffold13671: 2239876-2247518 Boechera stricta
Bostr.13671s0416 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 2242519-2247518 Boechera stricta
Bostr.13671s0416 10.0kb upstream 10.0kb upstream 12643 true Scaffold13671: 2229876-2242518 Boechera stricta
Bostr.13671s0416 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 2229876-2239875 Boechera stricta
Bostr.13671s0416 10.0kb downstream 10.0kb downstream 12643 true Scaffold13671: 2239876-2252518 Boechera stricta
Bostr.13671s0416 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 2242519-2252518 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370418 5261 Brassicaceae View MSA
123839498 5264 Brassicales-Malvales View MSA
124342145 5266 SBM View MSA
124241872 5268 Malvidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain