Gene : Bostr.13671s0220 B. stricta v1.2

Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  220
Name:  ? Bostr.13671s0220 Secondary Identifier:  ? PAC:30670603

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0220 0.5kb upstream 0.5kb upstream 2197 true Scaffold13671: 1134367-1136563 Boechera stricta
Bostr.13671s0220 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 1136064-1136563 Boechera stricta
Bostr.13671s0220 0.5kb downstream 0.5kb downstream 2197 true Scaffold13671: 1133867-1136063 Boechera stricta
Bostr.13671s0220 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 1133867-1134366 Boechera stricta
Bostr.13671s0220 1.0kb upstream 1.0kb upstream 2697 true Scaffold13671: 1134367-1137063 Boechera stricta
Bostr.13671s0220 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 1136064-1137063 Boechera stricta
Bostr.13671s0220 1.0kb downstream 1.0kb downstream 2697 true Scaffold13671: 1133367-1136063 Boechera stricta
Bostr.13671s0220 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 1133367-1134366 Boechera stricta
Bostr.13671s0220 2.0kb upstream 2.0kb upstream 3697 true Scaffold13671: 1134367-1138063 Boechera stricta
Bostr.13671s0220 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 1136064-1138063 Boechera stricta
Bostr.13671s0220 2.0kb downstream 2.0kb downstream 3697 true Scaffold13671: 1132367-1136063 Boechera stricta
Bostr.13671s0220 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 1132367-1134366 Boechera stricta
Bostr.13671s0220 5.0kb upstream 5.0kb upstream 6697 true Scaffold13671: 1134367-1141063 Boechera stricta
Bostr.13671s0220 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 1136064-1141063 Boechera stricta
Bostr.13671s0220 5.0kb downstream 5.0kb downstream 6697 true Scaffold13671: 1129367-1136063 Boechera stricta
Bostr.13671s0220 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 1129367-1134366 Boechera stricta
Bostr.13671s0220 10.0kb upstream 10.0kb upstream 11697 true Scaffold13671: 1134367-1146063 Boechera stricta
Bostr.13671s0220 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 1136064-1146063 Boechera stricta
Bostr.13671s0220 10.0kb downstream 10.0kb downstream 11697 true Scaffold13671: 1124367-1136063 Boechera stricta
Bostr.13671s0220 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 1124367-1134366 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381235 5261 Brassicaceae View MSA
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain