Gene : Bostr.13671s0288 B. stricta v1.2
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  288
Name:  ? Bostr.13671s0288 Secondary Identifier:  ? PAC:30670243
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6129 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0288 0.5kb upstream 0.5kb upstream 2974 true Scaffold13671: 1526988-1529961 Boechera stricta
Bostr.13671s0288 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 1526988-1527487 Boechera stricta
Bostr.13671s0288 0.5kb downstream 0.5kb downstream 2974 true Scaffold13671: 1527488-1530461 Boechera stricta
Bostr.13671s0288 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 1529962-1530461 Boechera stricta
Bostr.13671s0288 1.0kb upstream 1.0kb upstream 3474 true Scaffold13671: 1526488-1529961 Boechera stricta
Bostr.13671s0288 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 1526488-1527487 Boechera stricta
Bostr.13671s0288 1.0kb downstream 1.0kb downstream 3474 true Scaffold13671: 1527488-1530961 Boechera stricta
Bostr.13671s0288 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 1529962-1530961 Boechera stricta
Bostr.13671s0288 2.0kb upstream 2.0kb upstream 4474 true Scaffold13671: 1525488-1529961 Boechera stricta
Bostr.13671s0288 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 1525488-1527487 Boechera stricta
Bostr.13671s0288 2.0kb downstream 2.0kb downstream 4474 true Scaffold13671: 1527488-1531961 Boechera stricta
Bostr.13671s0288 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 1529962-1531961 Boechera stricta
Bostr.13671s0288 5.0kb upstream 5.0kb upstream 7474 true Scaffold13671: 1522488-1529961 Boechera stricta
Bostr.13671s0288 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 1522488-1527487 Boechera stricta
Bostr.13671s0288 5.0kb downstream 5.0kb downstream 7474 true Scaffold13671: 1527488-1534961 Boechera stricta
Bostr.13671s0288 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 1529962-1534961 Boechera stricta
Bostr.13671s0288 10.0kb upstream 10.0kb upstream 12474 true Scaffold13671: 1517488-1529961 Boechera stricta
Bostr.13671s0288 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 1517488-1527487 Boechera stricta
Bostr.13671s0288 10.0kb downstream 10.0kb downstream 12474 true Scaffold13671: 1527488-1539961 Boechera stricta
Bostr.13671s0288 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 1529962-1539961 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366386 5261 Brassicaceae View MSA
123840405 5264 Brassicales-Malvales View MSA
124342513 5266 SBM View MSA
124238686 5268 Malvidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain