Gene : Bostr.13671s0300 B. stricta v1.2

Defline:  (1 of 3) PTHR11206:SF140 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  300
Name:  ? Bostr.13671s0300 Secondary Identifier:  ? PAC:30670373

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0300 0.5kb upstream 0.5kb upstream 4188 true Scaffold13671: 1584326-1588513 Boechera stricta
Bostr.13671s0300 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 1584326-1584825 Boechera stricta
Bostr.13671s0300 0.5kb downstream 0.5kb downstream 4188 true Scaffold13671: 1584826-1589013 Boechera stricta
Bostr.13671s0300 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 1588514-1589013 Boechera stricta
Bostr.13671s0300 1.0kb upstream 1.0kb upstream 4688 true Scaffold13671: 1583826-1588513 Boechera stricta
Bostr.13671s0300 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 1583826-1584825 Boechera stricta
Bostr.13671s0300 1.0kb downstream 1.0kb downstream 4688 true Scaffold13671: 1584826-1589513 Boechera stricta
Bostr.13671s0300 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 1588514-1589513 Boechera stricta
Bostr.13671s0300 2.0kb upstream 2.0kb upstream 5688 true Scaffold13671: 1582826-1588513 Boechera stricta
Bostr.13671s0300 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 1582826-1584825 Boechera stricta
Bostr.13671s0300 2.0kb downstream 2.0kb downstream 5688 true Scaffold13671: 1584826-1590513 Boechera stricta
Bostr.13671s0300 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 1588514-1590513 Boechera stricta
Bostr.13671s0300 5.0kb upstream 5.0kb upstream 8688 true Scaffold13671: 1579826-1588513 Boechera stricta
Bostr.13671s0300 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 1579826-1584825 Boechera stricta
Bostr.13671s0300 5.0kb downstream 5.0kb downstream 8688 true Scaffold13671: 1584826-1593513 Boechera stricta
Bostr.13671s0300 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 1588514-1593513 Boechera stricta
Bostr.13671s0300 10.0kb upstream 10.0kb upstream 13688 true Scaffold13671: 1574826-1588513 Boechera stricta
Bostr.13671s0300 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 1574826-1584825 Boechera stricta
Bostr.13671s0300 10.0kb downstream 10.0kb downstream 13688 true Scaffold13671: 1584826-1598513 Boechera stricta
Bostr.13671s0300 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 1588514-1598513 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364738 5261 Brassicaceae View MSA
123798818 5264 Brassicales-Malvales View MSA
124296406 5266 SBM View MSA
124251787 5268 Malvidae View MSA
124071772 5270 Rosid View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain