Gene : Bostr.13671s0112 B. stricta v1.2
Defline:  (1 of 1) PTHR12161:SF23 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  112
Name:  ? Bostr.13671s0112 Secondary Identifier:  ? PAC:30670396
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0112 0.5kb upstream 0.5kb upstream 2344 true Scaffold13671: 597744-600087 Boechera stricta
Bostr.13671s0112 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 597744-598243 Boechera stricta
Bostr.13671s0112 0.5kb downstream 0.5kb downstream 2344 true Scaffold13671: 598244-600587 Boechera stricta
Bostr.13671s0112 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 600088-600587 Boechera stricta
Bostr.13671s0112 1.0kb upstream 1.0kb upstream 2844 true Scaffold13671: 597244-600087 Boechera stricta
Bostr.13671s0112 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 597244-598243 Boechera stricta
Bostr.13671s0112 1.0kb downstream 1.0kb downstream 2844 true Scaffold13671: 598244-601087 Boechera stricta
Bostr.13671s0112 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 600088-601087 Boechera stricta
Bostr.13671s0112 2.0kb upstream 2.0kb upstream 3844 true Scaffold13671: 596244-600087 Boechera stricta
Bostr.13671s0112 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 596244-598243 Boechera stricta
Bostr.13671s0112 2.0kb downstream 2.0kb downstream 3844 true Scaffold13671: 598244-602087 Boechera stricta
Bostr.13671s0112 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 600088-602087 Boechera stricta
Bostr.13671s0112 5.0kb upstream 5.0kb upstream 6844 true Scaffold13671: 593244-600087 Boechera stricta
Bostr.13671s0112 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 593244-598243 Boechera stricta
Bostr.13671s0112 5.0kb downstream 5.0kb downstream 6844 true Scaffold13671: 598244-605087 Boechera stricta
Bostr.13671s0112 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 600088-605087 Boechera stricta
Bostr.13671s0112 10.0kb upstream 10.0kb upstream 11844 true Scaffold13671: 588244-600087 Boechera stricta
Bostr.13671s0112 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 588244-598243 Boechera stricta
Bostr.13671s0112 10.0kb downstream 10.0kb downstream 11844 true Scaffold13671: 598244-610087 Boechera stricta
Bostr.13671s0112 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 600088-610087 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361971 5261 Brassicaceae View MSA
123841424 5264 Brassicales-Malvales View MSA
124337126 5266 SBM View MSA
124241969 5268 Malvidae View MSA
124066653 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain