Gene : Bostr.13671s0118 B. stricta v1.2
Defline:  (1 of 4) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  118
Name:  ? Bostr.13671s0118 Secondary Identifier:  ? PAC:30670577
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-735 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0118 0.5kb upstream 0.5kb upstream 2014 true Scaffold13671: 629332-631345 Boechera stricta
Bostr.13671s0118 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 630846-631345 Boechera stricta
Bostr.13671s0118 0.5kb downstream 0.5kb downstream 2014 true Scaffold13671: 628832-630845 Boechera stricta
Bostr.13671s0118 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 628832-629331 Boechera stricta
Bostr.13671s0118 1.0kb upstream 1.0kb upstream 2514 true Scaffold13671: 629332-631845 Boechera stricta
Bostr.13671s0118 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 630846-631845 Boechera stricta
Bostr.13671s0118 1.0kb downstream 1.0kb downstream 2514 true Scaffold13671: 628332-630845 Boechera stricta
Bostr.13671s0118 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 628332-629331 Boechera stricta
Bostr.13671s0118 2.0kb upstream 2.0kb upstream 3514 true Scaffold13671: 629332-632845 Boechera stricta
Bostr.13671s0118 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 630846-632845 Boechera stricta
Bostr.13671s0118 2.0kb downstream 2.0kb downstream 3514 true Scaffold13671: 627332-630845 Boechera stricta
Bostr.13671s0118 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 627332-629331 Boechera stricta
Bostr.13671s0118 5.0kb upstream 5.0kb upstream 6514 true Scaffold13671: 629332-635845 Boechera stricta
Bostr.13671s0118 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 630846-635845 Boechera stricta
Bostr.13671s0118 5.0kb downstream 5.0kb downstream 6514 true Scaffold13671: 624332-630845 Boechera stricta
Bostr.13671s0118 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 624332-629331 Boechera stricta
Bostr.13671s0118 10.0kb upstream 10.0kb upstream 11514 true Scaffold13671: 629332-640845 Boechera stricta
Bostr.13671s0118 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 630846-640845 Boechera stricta
Bostr.13671s0118 10.0kb downstream 10.0kb downstream 11514 true Scaffold13671: 619332-630845 Boechera stricta
Bostr.13671s0118 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 619332-629331 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380510 5261 Brassicaceae View MSA
123828498 5264 Brassicales-Malvales View MSA
124339249 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain