Gene : Bostr.13671s0076 B. stricta v1.2
Defline:  (1 of 1) PTHR12770:SF22 - UPF0420 PROTEIN C16ORF58 Genomic Order:  76
Name:  ? Bostr.13671s0076 Secondary Identifier:  ? PAC:30670357
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13671s0076 0.5kb upstream 0.5kb upstream 3472 true Scaffold13671: 361359-364830 Boechera stricta
Bostr.13671s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold13671: 361359-361858 Boechera stricta
Bostr.13671s0076 0.5kb downstream 0.5kb downstream 3472 true Scaffold13671: 361859-365330 Boechera stricta
Bostr.13671s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold13671: 364831-365330 Boechera stricta
Bostr.13671s0076 1.0kb upstream 1.0kb upstream 3972 true Scaffold13671: 360859-364830 Boechera stricta
Bostr.13671s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold13671: 360859-361858 Boechera stricta
Bostr.13671s0076 1.0kb downstream 1.0kb downstream 3972 true Scaffold13671: 361859-365830 Boechera stricta
Bostr.13671s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold13671: 364831-365830 Boechera stricta
Bostr.13671s0076 2.0kb upstream 2.0kb upstream 4972 true Scaffold13671: 359859-364830 Boechera stricta
Bostr.13671s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold13671: 359859-361858 Boechera stricta
Bostr.13671s0076 2.0kb downstream 2.0kb downstream 4972 true Scaffold13671: 361859-366830 Boechera stricta
Bostr.13671s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold13671: 364831-366830 Boechera stricta
Bostr.13671s0076 5.0kb upstream 5.0kb upstream 7972 true Scaffold13671: 356859-364830 Boechera stricta
Bostr.13671s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold13671: 356859-361858 Boechera stricta
Bostr.13671s0076 5.0kb downstream 5.0kb downstream 7972 true Scaffold13671: 361859-369830 Boechera stricta
Bostr.13671s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold13671: 364831-369830 Boechera stricta
Bostr.13671s0076 10.0kb upstream 10.0kb upstream 12972 true Scaffold13671: 351859-364830 Boechera stricta
Bostr.13671s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold13671: 351859-361858 Boechera stricta
Bostr.13671s0076 10.0kb downstream 10.0kb downstream 12972 true Scaffold13671: 361859-374830 Boechera stricta
Bostr.13671s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold13671: 364831-374830 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341491 5261 Brassicaceae Singleton cluster - no MSA
123841065 5264 Brassicales-Malvales View MSA
124342337 5266 SBM View MSA
124252208 5268 Malvidae View MSA
124065742 5270 Rosid View MSA
123743943 5271 Pentapetalae View MSA
122788740 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain