Gene : Bostr.7867s1298 B. stricta v1.2

Defline:  (1 of 143) PF00847 - AP2 domain (AP2) Genomic Order:  1298
Name:  ? Bostr.7867s1298 Secondary Identifier:  ? PAC:30658720

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1298 0.5kb upstream 0.5kb upstream 1654 true Scaffold7867: 6623040-6624693 Boechera stricta
Bostr.7867s1298 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6623040-6623539 Boechera stricta
Bostr.7867s1298 0.5kb downstream 0.5kb downstream 1654 true Scaffold7867: 6623540-6625193 Boechera stricta
Bostr.7867s1298 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6624694-6625193 Boechera stricta
Bostr.7867s1298 1.0kb upstream 1.0kb upstream 2154 true Scaffold7867: 6622540-6624693 Boechera stricta
Bostr.7867s1298 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6622540-6623539 Boechera stricta
Bostr.7867s1298 1.0kb downstream 1.0kb downstream 2154 true Scaffold7867: 6623540-6625693 Boechera stricta
Bostr.7867s1298 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6624694-6625693 Boechera stricta
Bostr.7867s1298 2.0kb upstream 2.0kb upstream 3154 true Scaffold7867: 6621540-6624693 Boechera stricta
Bostr.7867s1298 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6621540-6623539 Boechera stricta
Bostr.7867s1298 2.0kb downstream 2.0kb downstream 3154 true Scaffold7867: 6623540-6626693 Boechera stricta
Bostr.7867s1298 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6624694-6626693 Boechera stricta
Bostr.7867s1298 5.0kb upstream 5.0kb upstream 6154 true Scaffold7867: 6618540-6624693 Boechera stricta
Bostr.7867s1298 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6618540-6623539 Boechera stricta
Bostr.7867s1298 5.0kb downstream 5.0kb downstream 6154 true Scaffold7867: 6623540-6629693 Boechera stricta
Bostr.7867s1298 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6624694-6629693 Boechera stricta
Bostr.7867s1298 10.0kb upstream 10.0kb upstream 11154 true Scaffold7867: 6613540-6624693 Boechera stricta
Bostr.7867s1298 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6613540-6623539 Boechera stricta
Bostr.7867s1298 10.0kb downstream 10.0kb downstream 11154 true Scaffold7867: 6623540-6634693 Boechera stricta
Bostr.7867s1298 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6624694-6634693 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376898 5261 Brassicaceae View MSA
123835468 5264 Brassicales-Malvales View MSA
124348988 5266 SBM View MSA
124240544 5268 Malvidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain