Gene : Bostr.13404s0046 B. stricta v1.2
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  46
Name:  ? Bostr.13404s0046 Secondary Identifier:  ? PAC:30673407
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13404s0046 0.5kb upstream 0.5kb upstream 5316 true Scaffold13404: 768497-773812 Boechera stricta
Bostr.13404s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold13404: 773313-773812 Boechera stricta
Bostr.13404s0046 0.5kb downstream 0.5kb downstream 5316 true Scaffold13404: 767997-773312 Boechera stricta
Bostr.13404s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold13404: 767997-768496 Boechera stricta
Bostr.13404s0046 1.0kb upstream 1.0kb upstream 5816 true Scaffold13404: 768497-774312 Boechera stricta
Bostr.13404s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold13404: 773313-774312 Boechera stricta
Bostr.13404s0046 1.0kb downstream 1.0kb downstream 5816 true Scaffold13404: 767497-773312 Boechera stricta
Bostr.13404s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold13404: 767497-768496 Boechera stricta
Bostr.13404s0046 2.0kb upstream 2.0kb upstream 6816 true Scaffold13404: 768497-775312 Boechera stricta
Bostr.13404s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold13404: 773313-775312 Boechera stricta
Bostr.13404s0046 2.0kb downstream 2.0kb downstream 6816 true Scaffold13404: 766497-773312 Boechera stricta
Bostr.13404s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold13404: 766497-768496 Boechera stricta
Bostr.13404s0046 5.0kb upstream 5.0kb upstream 9816 true Scaffold13404: 768497-778312 Boechera stricta
Bostr.13404s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold13404: 773313-778312 Boechera stricta
Bostr.13404s0046 5.0kb downstream 5.0kb downstream 9816 true Scaffold13404: 763497-773312 Boechera stricta
Bostr.13404s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold13404: 763497-768496 Boechera stricta
Bostr.13404s0046 10.0kb upstream 10.0kb upstream 14816 true Scaffold13404: 768497-783312 Boechera stricta
Bostr.13404s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold13404: 773313-783312 Boechera stricta
Bostr.13404s0046 10.0kb downstream 10.0kb downstream 14816 true Scaffold13404: 758497-773312 Boechera stricta
Bostr.13404s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold13404: 758497-768496 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364473 5261 Brassicaceae View MSA
123840872 5264 Brassicales-Malvales View MSA
124348014 5266 SBM View MSA
124245951 5268 Malvidae View MSA
124063703 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain