Gene : Bostr.15774s0251 B. stricta v1.2
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  251
Name:  ? Bostr.15774s0251 Secondary Identifier:  ? PAC:30666024
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta DETOX1-PWY Boechera stricta pathologic  
Bstricta DETOX1-PWY-1 Boechera stricta pathologic  
Bstricta PWY-6854 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0251 0.5kb upstream 0.5kb upstream 3859 true Scaffold15774: 2561122-2564980 Boechera stricta
Bostr.15774s0251 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 2564481-2564980 Boechera stricta
Bostr.15774s0251 0.5kb downstream 0.5kb downstream 3859 true Scaffold15774: 2560622-2564480 Boechera stricta
Bostr.15774s0251 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 2560622-2561121 Boechera stricta
Bostr.15774s0251 1.0kb upstream 1.0kb upstream 4359 true Scaffold15774: 2561122-2565480 Boechera stricta
Bostr.15774s0251 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 2564481-2565480 Boechera stricta
Bostr.15774s0251 1.0kb downstream 1.0kb downstream 4359 true Scaffold15774: 2560122-2564480 Boechera stricta
Bostr.15774s0251 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 2560122-2561121 Boechera stricta
Bostr.15774s0251 2.0kb upstream 2.0kb upstream 5359 true Scaffold15774: 2561122-2566480 Boechera stricta
Bostr.15774s0251 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 2564481-2566480 Boechera stricta
Bostr.15774s0251 2.0kb downstream 2.0kb downstream 5359 true Scaffold15774: 2559122-2564480 Boechera stricta
Bostr.15774s0251 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 2559122-2561121 Boechera stricta
Bostr.15774s0251 5.0kb upstream 5.0kb upstream 8359 true Scaffold15774: 2561122-2569480 Boechera stricta
Bostr.15774s0251 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 2564481-2569480 Boechera stricta
Bostr.15774s0251 5.0kb downstream 5.0kb downstream 8359 true Scaffold15774: 2556122-2564480 Boechera stricta
Bostr.15774s0251 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 2556122-2561121 Boechera stricta
Bostr.15774s0251 10.0kb upstream 10.0kb upstream 13359 true Scaffold15774: 2561122-2574480 Boechera stricta
Bostr.15774s0251 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 2564481-2574480 Boechera stricta
Bostr.15774s0251 10.0kb downstream 10.0kb downstream 13359 true Scaffold15774: 2551122-2564480 Boechera stricta
Bostr.15774s0251 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 2551122-2561121 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370547 5261 Brassicaceae View MSA
123830652 5264 Brassicales-Malvales View MSA
124342635 5266 SBM View MSA
124246967 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain