Gene : Bostr.15774s0022 B. stricta v1.2

Defline:  (1 of 1) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  22
Name:  ? Bostr.15774s0022 Secondary Identifier:  ? PAC:30665824

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5381 Boechera stricta pathologic  
Bstricta PWY-5695 Boechera stricta pathologic  
Bstricta PWY-6596 Boechera stricta pathologic  
Bstricta PWY-6606 Boechera stricta pathologic  
Bstricta PWY-6608 Boechera stricta pathologic  
Bstricta PWY-7185 Boechera stricta pathologic  
Bstricta SALVADEHYPOX-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0022 0.5kb upstream 0.5kb upstream 4678 true Scaffold15774: 365586-370263 Boechera stricta
Bostr.15774s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 365586-366085 Boechera stricta
Bostr.15774s0022 0.5kb downstream 0.5kb downstream 4678 true Scaffold15774: 366086-370763 Boechera stricta
Bostr.15774s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 370264-370763 Boechera stricta
Bostr.15774s0022 1.0kb upstream 1.0kb upstream 5178 true Scaffold15774: 365086-370263 Boechera stricta
Bostr.15774s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 365086-366085 Boechera stricta
Bostr.15774s0022 1.0kb downstream 1.0kb downstream 5178 true Scaffold15774: 366086-371263 Boechera stricta
Bostr.15774s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 370264-371263 Boechera stricta
Bostr.15774s0022 2.0kb upstream 2.0kb upstream 6178 true Scaffold15774: 364086-370263 Boechera stricta
Bostr.15774s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 364086-366085 Boechera stricta
Bostr.15774s0022 2.0kb downstream 2.0kb downstream 6178 true Scaffold15774: 366086-372263 Boechera stricta
Bostr.15774s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 370264-372263 Boechera stricta
Bostr.15774s0022 5.0kb upstream 5.0kb upstream 9178 true Scaffold15774: 361086-370263 Boechera stricta
Bostr.15774s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 361086-366085 Boechera stricta
Bostr.15774s0022 5.0kb downstream 5.0kb downstream 9178 true Scaffold15774: 366086-375263 Boechera stricta
Bostr.15774s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 370264-375263 Boechera stricta
Bostr.15774s0022 10.0kb upstream 10.0kb upstream 14178 true Scaffold15774: 356086-370263 Boechera stricta
Bostr.15774s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 356086-366085 Boechera stricta
Bostr.15774s0022 10.0kb downstream 10.0kb downstream 14178 true Scaffold15774: 366086-380263 Boechera stricta
Bostr.15774s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 370264-380263 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372227 5261 Brassicaceae View MSA
123831857 5264 Brassicales-Malvales View MSA
124339151 5266 SBM View MSA
124240270 5268 Malvidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain