Gene : Bostr.15774s0017 B. stricta v1.2
Defline:  (1 of 2) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Genomic Order:  17
Name:  ? Bostr.15774s0017 Secondary Identifier:  ? PAC:30665734
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5837 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15774s0017 0.5kb upstream 0.5kb upstream 2000 true Scaffold15774: 317937-319936 Boechera stricta
Bostr.15774s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold15774: 317937-318436 Boechera stricta
Bostr.15774s0017 0.5kb downstream 0.5kb downstream 2000 true Scaffold15774: 318437-320436 Boechera stricta
Bostr.15774s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold15774: 319937-320436 Boechera stricta
Bostr.15774s0017 1.0kb upstream 1.0kb upstream 2500 true Scaffold15774: 317437-319936 Boechera stricta
Bostr.15774s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold15774: 317437-318436 Boechera stricta
Bostr.15774s0017 1.0kb downstream 1.0kb downstream 2500 true Scaffold15774: 318437-320936 Boechera stricta
Bostr.15774s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold15774: 319937-320936 Boechera stricta
Bostr.15774s0017 2.0kb upstream 2.0kb upstream 3500 true Scaffold15774: 316437-319936 Boechera stricta
Bostr.15774s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold15774: 316437-318436 Boechera stricta
Bostr.15774s0017 2.0kb downstream 2.0kb downstream 3500 true Scaffold15774: 318437-321936 Boechera stricta
Bostr.15774s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold15774: 319937-321936 Boechera stricta
Bostr.15774s0017 5.0kb upstream 5.0kb upstream 6500 true Scaffold15774: 313437-319936 Boechera stricta
Bostr.15774s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold15774: 313437-318436 Boechera stricta
Bostr.15774s0017 5.0kb downstream 5.0kb downstream 6500 true Scaffold15774: 318437-324936 Boechera stricta
Bostr.15774s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold15774: 319937-324936 Boechera stricta
Bostr.15774s0017 10.0kb upstream 10.0kb upstream 11500 true Scaffold15774: 308437-319936 Boechera stricta
Bostr.15774s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold15774: 308437-318436 Boechera stricta
Bostr.15774s0017 10.0kb downstream 10.0kb downstream 11500 true Scaffold15774: 318437-329936 Boechera stricta
Bostr.15774s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold15774: 319937-329936 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369966 5261 Brassicaceae View MSA
123799873 5264 Brassicales-Malvales View MSA
124297353 5266 SBM View MSA
124149272 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain