Gene : Bostr.15697s0400 B. stricta v1.2
Defline:  (1 of 2) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  400
Name:  ? Bostr.15697s0400 Secondary Identifier:  ? PAC:30662352
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5963 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0400 0.5kb upstream 0.5kb upstream 2748 true Scaffold15697: 2581697-2584444 Boechera stricta
Bostr.15697s0400 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 2581697-2582196 Boechera stricta
Bostr.15697s0400 0.5kb downstream 0.5kb downstream 2748 true Scaffold15697: 2582197-2584944 Boechera stricta
Bostr.15697s0400 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 2584445-2584944 Boechera stricta
Bostr.15697s0400 1.0kb upstream 1.0kb upstream 3248 true Scaffold15697: 2581197-2584444 Boechera stricta
Bostr.15697s0400 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 2581197-2582196 Boechera stricta
Bostr.15697s0400 1.0kb downstream 1.0kb downstream 3248 true Scaffold15697: 2582197-2585444 Boechera stricta
Bostr.15697s0400 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 2584445-2585444 Boechera stricta
Bostr.15697s0400 2.0kb upstream 2.0kb upstream 4248 true Scaffold15697: 2580197-2584444 Boechera stricta
Bostr.15697s0400 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 2580197-2582196 Boechera stricta
Bostr.15697s0400 2.0kb downstream 2.0kb downstream 4248 true Scaffold15697: 2582197-2586444 Boechera stricta
Bostr.15697s0400 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 2584445-2586444 Boechera stricta
Bostr.15697s0400 5.0kb upstream 5.0kb upstream 7248 true Scaffold15697: 2577197-2584444 Boechera stricta
Bostr.15697s0400 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 2577197-2582196 Boechera stricta
Bostr.15697s0400 5.0kb downstream 5.0kb downstream 7248 true Scaffold15697: 2582197-2589444 Boechera stricta
Bostr.15697s0400 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 2584445-2589444 Boechera stricta
Bostr.15697s0400 10.0kb upstream 10.0kb upstream 12248 true Scaffold15697: 2572197-2584444 Boechera stricta
Bostr.15697s0400 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 2572197-2582196 Boechera stricta
Bostr.15697s0400 10.0kb downstream 10.0kb downstream 12248 true Scaffold15697: 2582197-2594444 Boechera stricta
Bostr.15697s0400 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 2584445-2594444 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365155 5261 Brassicaceae View MSA
123832296 5264 Brassicales-Malvales View MSA
124350481 5266 SBM View MSA
124237148 5268 Malvidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain