Gene : Bostr.15697s0306 B. stricta v1.2
Defline:  (1 of 12) PF04434//PF10551 - SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  306
Name:  ? Bostr.15697s0306 Secondary Identifier:  ? PAC:30662263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0306 0.5kb upstream 0.5kb upstream 7125 true Scaffold15697: 1894940-1902064 Boechera stricta
Bostr.15697s0306 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 1901565-1902064 Boechera stricta
Bostr.15697s0306 0.5kb downstream 0.5kb downstream 7125 true Scaffold15697: 1894440-1901564 Boechera stricta
Bostr.15697s0306 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 1894440-1894939 Boechera stricta
Bostr.15697s0306 1.0kb upstream 1.0kb upstream 7625 true Scaffold15697: 1894940-1902564 Boechera stricta
Bostr.15697s0306 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 1901565-1902564 Boechera stricta
Bostr.15697s0306 1.0kb downstream 1.0kb downstream 7625 true Scaffold15697: 1893940-1901564 Boechera stricta
Bostr.15697s0306 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 1893940-1894939 Boechera stricta
Bostr.15697s0306 2.0kb upstream 2.0kb upstream 8625 true Scaffold15697: 1894940-1903564 Boechera stricta
Bostr.15697s0306 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 1901565-1903564 Boechera stricta
Bostr.15697s0306 2.0kb downstream 2.0kb downstream 8625 true Scaffold15697: 1892940-1901564 Boechera stricta
Bostr.15697s0306 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 1892940-1894939 Boechera stricta
Bostr.15697s0306 5.0kb upstream 5.0kb upstream 11625 true Scaffold15697: 1894940-1906564 Boechera stricta
Bostr.15697s0306 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 1901565-1906564 Boechera stricta
Bostr.15697s0306 5.0kb downstream 5.0kb downstream 11625 true Scaffold15697: 1889940-1901564 Boechera stricta
Bostr.15697s0306 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 1889940-1894939 Boechera stricta
Bostr.15697s0306 10.0kb upstream 10.0kb upstream 16625 true Scaffold15697: 1894940-1911564 Boechera stricta
Bostr.15697s0306 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 1901565-1911564 Boechera stricta
Bostr.15697s0306 10.0kb downstream 10.0kb downstream 16625 true Scaffold15697: 1884940-1901564 Boechera stricta
Bostr.15697s0306 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 1884940-1894939 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380038 5261 Brassicaceae View MSA
123842361 5264 Brassicales-Malvales View MSA
124323430 5266 SBM View MSA
124169464 5268 Malvidae View MSA
124041733 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain