Gene : Bostr.15697s0349 B. stricta v1.2
Defline:  (1 of 2) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  349
Name:  ? Bostr.15697s0349 Secondary Identifier:  ? PAC:30662203
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-101 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0349 0.5kb upstream 0.5kb upstream 2607 true Scaffold15697: 2254419-2257025 Boechera stricta
Bostr.15697s0349 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 2256526-2257025 Boechera stricta
Bostr.15697s0349 0.5kb downstream 0.5kb downstream 2607 true Scaffold15697: 2253919-2256525 Boechera stricta
Bostr.15697s0349 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 2253919-2254418 Boechera stricta
Bostr.15697s0349 1.0kb upstream 1.0kb upstream 3107 true Scaffold15697: 2254419-2257525 Boechera stricta
Bostr.15697s0349 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 2256526-2257525 Boechera stricta
Bostr.15697s0349 1.0kb downstream 1.0kb downstream 3107 true Scaffold15697: 2253419-2256525 Boechera stricta
Bostr.15697s0349 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 2253419-2254418 Boechera stricta
Bostr.15697s0349 2.0kb upstream 2.0kb upstream 4107 true Scaffold15697: 2254419-2258525 Boechera stricta
Bostr.15697s0349 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 2256526-2258525 Boechera stricta
Bostr.15697s0349 2.0kb downstream 2.0kb downstream 4107 true Scaffold15697: 2252419-2256525 Boechera stricta
Bostr.15697s0349 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 2252419-2254418 Boechera stricta
Bostr.15697s0349 5.0kb upstream 5.0kb upstream 7107 true Scaffold15697: 2254419-2261525 Boechera stricta
Bostr.15697s0349 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 2256526-2261525 Boechera stricta
Bostr.15697s0349 5.0kb downstream 5.0kb downstream 7107 true Scaffold15697: 2249419-2256525 Boechera stricta
Bostr.15697s0349 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 2249419-2254418 Boechera stricta
Bostr.15697s0349 10.0kb upstream 10.0kb upstream 12107 true Scaffold15697: 2254419-2266525 Boechera stricta
Bostr.15697s0349 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 2256526-2266525 Boechera stricta
Bostr.15697s0349 10.0kb downstream 10.0kb downstream 12107 true Scaffold15697: 2244419-2256525 Boechera stricta
Bostr.15697s0349 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 2244419-2254418 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
122363969 5261 Brassicaceae View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain