Gene : Bostr.15697s0237 B. stricta v1.2
Defline:  (1 of 2) PTHR33596:SF3 - COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  237
Name:  ? Bostr.15697s0237 Secondary Identifier:  ? PAC:30662355
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0237 0.5kb upstream 0.5kb upstream 1942 true Scaffold15697: 1430839-1432780 Boechera stricta
Bostr.15697s0237 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 1432281-1432780 Boechera stricta
Bostr.15697s0237 0.5kb downstream 0.5kb downstream 1942 true Scaffold15697: 1430339-1432280 Boechera stricta
Bostr.15697s0237 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 1430339-1430838 Boechera stricta
Bostr.15697s0237 1.0kb upstream 1.0kb upstream 2442 true Scaffold15697: 1430839-1433280 Boechera stricta
Bostr.15697s0237 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 1432281-1433280 Boechera stricta
Bostr.15697s0237 1.0kb downstream 1.0kb downstream 2442 true Scaffold15697: 1429839-1432280 Boechera stricta
Bostr.15697s0237 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 1429839-1430838 Boechera stricta
Bostr.15697s0237 2.0kb upstream 2.0kb upstream 3442 true Scaffold15697: 1430839-1434280 Boechera stricta
Bostr.15697s0237 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 1432281-1434280 Boechera stricta
Bostr.15697s0237 2.0kb downstream 2.0kb downstream 3442 true Scaffold15697: 1428839-1432280 Boechera stricta
Bostr.15697s0237 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 1428839-1430838 Boechera stricta
Bostr.15697s0237 5.0kb upstream 5.0kb upstream 6442 true Scaffold15697: 1430839-1437280 Boechera stricta
Bostr.15697s0237 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 1432281-1437280 Boechera stricta
Bostr.15697s0237 5.0kb downstream 5.0kb downstream 6442 true Scaffold15697: 1425839-1432280 Boechera stricta
Bostr.15697s0237 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 1425839-1430838 Boechera stricta
Bostr.15697s0237 10.0kb upstream 10.0kb upstream 11442 true Scaffold15697: 1430839-1442280 Boechera stricta
Bostr.15697s0237 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 1432281-1442280 Boechera stricta
Bostr.15697s0237 10.0kb downstream 10.0kb downstream 11442 true Scaffold15697: 1420839-1432280 Boechera stricta
Bostr.15697s0237 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 1420839-1430838 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
122343296 5261 Brassicaceae View MSA
123783539 5264 Brassicales-Malvales View MSA
124346697 5266 SBM View MSA
124242929 5268 Malvidae View MSA
124068573 5270 Rosid View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain