Gene : Bostr.15697s0058 B. stricta v1.2

Defline:  (1 of 3) PTHR12612 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  58
Name:  ? Bostr.15697s0058 Secondary Identifier:  ? PAC:30662152

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0058 0.5kb upstream 0.5kb upstream 1960 true Scaffold15697: 294791-296750 Boechera stricta
Bostr.15697s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 296251-296750 Boechera stricta
Bostr.15697s0058 0.5kb downstream 0.5kb downstream 1960 true Scaffold15697: 294291-296250 Boechera stricta
Bostr.15697s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 294291-294790 Boechera stricta
Bostr.15697s0058 1.0kb upstream 1.0kb upstream 2460 true Scaffold15697: 294791-297250 Boechera stricta
Bostr.15697s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 296251-297250 Boechera stricta
Bostr.15697s0058 1.0kb downstream 1.0kb downstream 2460 true Scaffold15697: 293791-296250 Boechera stricta
Bostr.15697s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 293791-294790 Boechera stricta
Bostr.15697s0058 2.0kb upstream 2.0kb upstream 3460 true Scaffold15697: 294791-298250 Boechera stricta
Bostr.15697s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 296251-298250 Boechera stricta
Bostr.15697s0058 2.0kb downstream 2.0kb downstream 3460 true Scaffold15697: 292791-296250 Boechera stricta
Bostr.15697s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 292791-294790 Boechera stricta
Bostr.15697s0058 5.0kb upstream 5.0kb upstream 6460 true Scaffold15697: 294791-301250 Boechera stricta
Bostr.15697s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 296251-301250 Boechera stricta
Bostr.15697s0058 5.0kb downstream 5.0kb downstream 6460 true Scaffold15697: 289791-296250 Boechera stricta
Bostr.15697s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 289791-294790 Boechera stricta
Bostr.15697s0058 10.0kb upstream 10.0kb upstream 11460 true Scaffold15697: 294791-306250 Boechera stricta
Bostr.15697s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 296251-306250 Boechera stricta
Bostr.15697s0058 10.0kb downstream 10.0kb downstream 11460 true Scaffold15697: 284791-296250 Boechera stricta
Bostr.15697s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 284791-294790 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362281 5261 Brassicaceae View MSA
123838890 5264 Brassicales-Malvales View MSA
124346465 5266 SBM View MSA
124239660 5268 Malvidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain