Gene : Bostr.15697s0073 B. stricta v1.2
Defline:  (1 of 1) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  73
Name:  ? Bostr.15697s0073 Secondary Identifier:  ? PAC:30662156
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5980 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.15697s0073 0.5kb upstream 0.5kb upstream 2870 true Scaffold15697: 358183-361052 Boechera stricta
Bostr.15697s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold15697: 360553-361052 Boechera stricta
Bostr.15697s0073 0.5kb downstream 0.5kb downstream 2870 true Scaffold15697: 357683-360552 Boechera stricta
Bostr.15697s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold15697: 357683-358182 Boechera stricta
Bostr.15697s0073 1.0kb upstream 1.0kb upstream 3370 true Scaffold15697: 358183-361552 Boechera stricta
Bostr.15697s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold15697: 360553-361552 Boechera stricta
Bostr.15697s0073 1.0kb downstream 1.0kb downstream 3370 true Scaffold15697: 357183-360552 Boechera stricta
Bostr.15697s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold15697: 357183-358182 Boechera stricta
Bostr.15697s0073 2.0kb upstream 2.0kb upstream 4370 true Scaffold15697: 358183-362552 Boechera stricta
Bostr.15697s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold15697: 360553-362552 Boechera stricta
Bostr.15697s0073 2.0kb downstream 2.0kb downstream 4370 true Scaffold15697: 356183-360552 Boechera stricta
Bostr.15697s0073 2.0kb downstream 2.0kb downstream 2000 false Scaffold15697: 356183-358182 Boechera stricta
Bostr.15697s0073 5.0kb upstream 5.0kb upstream 7370 true Scaffold15697: 358183-365552 Boechera stricta
Bostr.15697s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold15697: 360553-365552 Boechera stricta
Bostr.15697s0073 5.0kb downstream 5.0kb downstream 7370 true Scaffold15697: 353183-360552 Boechera stricta
Bostr.15697s0073 5.0kb downstream 5.0kb downstream 5000 false Scaffold15697: 353183-358182 Boechera stricta
Bostr.15697s0073 10.0kb upstream 10.0kb upstream 12370 true Scaffold15697: 358183-370552 Boechera stricta
Bostr.15697s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold15697: 360553-370552 Boechera stricta
Bostr.15697s0073 10.0kb downstream 10.0kb downstream 12370 true Scaffold15697: 348183-360552 Boechera stricta
Bostr.15697s0073 10.0kb downstream 10.0kb downstream 10000 false Scaffold15697: 348183-358182 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377800 5261 Brassicaceae View MSA
123828573 5264 Brassicales-Malvales View MSA
124337730 5266 SBM View MSA
124244464 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain