Gene : Bostr.18473s0078 B. stricta v1.2
Defline:  (1 of 2) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  78
Name:  ? Bostr.18473s0078 Secondary Identifier:  ? PAC:30667014
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5188 Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0078 0.5kb upstream 0.5kb upstream 2538 true Scaffold18473: 419111-421648 Boechera stricta
Bostr.18473s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 421149-421648 Boechera stricta
Bostr.18473s0078 0.5kb downstream 0.5kb downstream 2538 true Scaffold18473: 418611-421148 Boechera stricta
Bostr.18473s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 418611-419110 Boechera stricta
Bostr.18473s0078 1.0kb upstream 1.0kb upstream 3038 true Scaffold18473: 419111-422148 Boechera stricta
Bostr.18473s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 421149-422148 Boechera stricta
Bostr.18473s0078 1.0kb downstream 1.0kb downstream 3038 true Scaffold18473: 418111-421148 Boechera stricta
Bostr.18473s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 418111-419110 Boechera stricta
Bostr.18473s0078 2.0kb upstream 2.0kb upstream 4038 true Scaffold18473: 419111-423148 Boechera stricta
Bostr.18473s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 421149-423148 Boechera stricta
Bostr.18473s0078 2.0kb downstream 2.0kb downstream 4038 true Scaffold18473: 417111-421148 Boechera stricta
Bostr.18473s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 417111-419110 Boechera stricta
Bostr.18473s0078 5.0kb upstream 5.0kb upstream 7038 true Scaffold18473: 419111-426148 Boechera stricta
Bostr.18473s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 421149-426148 Boechera stricta
Bostr.18473s0078 5.0kb downstream 5.0kb downstream 7038 true Scaffold18473: 414111-421148 Boechera stricta
Bostr.18473s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 414111-419110 Boechera stricta
Bostr.18473s0078 10.0kb upstream 10.0kb upstream 12038 true Scaffold18473: 419111-431148 Boechera stricta
Bostr.18473s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 421149-431148 Boechera stricta
Bostr.18473s0078 10.0kb downstream 10.0kb downstream 12038 true Scaffold18473: 409111-421148 Boechera stricta
Bostr.18473s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 409111-419110 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377192 5261 Brassicaceae View MSA
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain