Gene : Bostr.18351s0377 B. stricta v1.2

Defline:  (1 of 2) PTHR10887:SF359 - HELICASE SEN1 Genomic Order:  377
Name:  ? Bostr.18351s0377 Secondary Identifier:  ? PAC:30676822

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0377 0.5kb upstream 0.5kb upstream 6547 true Scaffold18351: 3091754-3098300 Boechera stricta
Bostr.18351s0377 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 3097801-3098300 Boechera stricta
Bostr.18351s0377 0.5kb downstream 0.5kb downstream 6547 true Scaffold18351: 3091254-3097800 Boechera stricta
Bostr.18351s0377 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 3091254-3091753 Boechera stricta
Bostr.18351s0377 1.0kb upstream 1.0kb upstream 7047 true Scaffold18351: 3091754-3098800 Boechera stricta
Bostr.18351s0377 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 3097801-3098800 Boechera stricta
Bostr.18351s0377 1.0kb downstream 1.0kb downstream 7047 true Scaffold18351: 3090754-3097800 Boechera stricta
Bostr.18351s0377 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 3090754-3091753 Boechera stricta
Bostr.18351s0377 2.0kb upstream 2.0kb upstream 8047 true Scaffold18351: 3091754-3099800 Boechera stricta
Bostr.18351s0377 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 3097801-3099800 Boechera stricta
Bostr.18351s0377 2.0kb downstream 2.0kb downstream 8047 true Scaffold18351: 3089754-3097800 Boechera stricta
Bostr.18351s0377 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 3089754-3091753 Boechera stricta
Bostr.18351s0377 5.0kb upstream 5.0kb upstream 11047 true Scaffold18351: 3091754-3102800 Boechera stricta
Bostr.18351s0377 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 3097801-3102800 Boechera stricta
Bostr.18351s0377 5.0kb downstream 5.0kb downstream 11047 true Scaffold18351: 3086754-3097800 Boechera stricta
Bostr.18351s0377 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 3086754-3091753 Boechera stricta
Bostr.18351s0377 10.0kb upstream 10.0kb upstream 16047 true Scaffold18351: 3091754-3107800 Boechera stricta
Bostr.18351s0377 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 3097801-3107800 Boechera stricta
Bostr.18351s0377 10.0kb downstream 10.0kb downstream 16047 true Scaffold18351: 3081754-3097800 Boechera stricta
Bostr.18351s0377 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 3081754-3091753 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343552 5261 Brassicaceae View MSA
123783718 5264 Brassicales-Malvales View MSA
124281934 5266 SBM View MSA
124136606 5268 Malvidae View MSA
123864442 5270 Rosid View MSA
123751960 5271 Pentapetalae View MSA
122793579 5272 Eudicot View MSA
122046375 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121350941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain