Gene : Bostr.18351s0301 B. stricta v1.2

Defline:  (1 of 2) PTHR23075:SF3 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  301
Name:  ? Bostr.18351s0301 Secondary Identifier:  ? PAC:30676618

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0301 0.5kb upstream 0.5kb upstream 3952 true Scaffold18351: 2422332-2426283 Boechera stricta
Bostr.18351s0301 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 2422332-2422831 Boechera stricta
Bostr.18351s0301 0.5kb downstream 0.5kb downstream 3952 true Scaffold18351: 2422832-2426783 Boechera stricta
Bostr.18351s0301 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 2426284-2426783 Boechera stricta
Bostr.18351s0301 1.0kb upstream 1.0kb upstream 4452 true Scaffold18351: 2421832-2426283 Boechera stricta
Bostr.18351s0301 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 2421832-2422831 Boechera stricta
Bostr.18351s0301 1.0kb downstream 1.0kb downstream 4452 true Scaffold18351: 2422832-2427283 Boechera stricta
Bostr.18351s0301 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 2426284-2427283 Boechera stricta
Bostr.18351s0301 2.0kb upstream 2.0kb upstream 5452 true Scaffold18351: 2420832-2426283 Boechera stricta
Bostr.18351s0301 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 2420832-2422831 Boechera stricta
Bostr.18351s0301 2.0kb downstream 2.0kb downstream 5452 true Scaffold18351: 2422832-2428283 Boechera stricta
Bostr.18351s0301 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 2426284-2428283 Boechera stricta
Bostr.18351s0301 5.0kb upstream 5.0kb upstream 8452 true Scaffold18351: 2417832-2426283 Boechera stricta
Bostr.18351s0301 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 2417832-2422831 Boechera stricta
Bostr.18351s0301 5.0kb downstream 5.0kb downstream 8452 true Scaffold18351: 2422832-2431283 Boechera stricta
Bostr.18351s0301 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 2426284-2431283 Boechera stricta
Bostr.18351s0301 10.0kb upstream 10.0kb upstream 13452 true Scaffold18351: 2412832-2426283 Boechera stricta
Bostr.18351s0301 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 2412832-2422831 Boechera stricta
Bostr.18351s0301 10.0kb downstream 10.0kb downstream 13452 true Scaffold18351: 2422832-2436283 Boechera stricta
Bostr.18351s0301 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 2426284-2436283 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365286 5261 Brassicaceae View MSA
123832087 5264 Brassicales-Malvales View MSA
124346721 5266 SBM View MSA
124240410 5268 Malvidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain