Gene : Bostr.18351s0175 B. stricta v1.2

Defline:  (1 of 3) PTHR32002:SF3 - PROTEIN NLP1-RELATED Genomic Order:  175
Name:  ? Bostr.18351s0175 Secondary Identifier:  ? PAC:30676781

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0175 0.5kb upstream 0.5kb upstream 5488 true Scaffold18351: 1612877-1618364 Boechera stricta
Bostr.18351s0175 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 1617865-1618364 Boechera stricta
Bostr.18351s0175 0.5kb downstream 0.5kb downstream 5488 true Scaffold18351: 1612377-1617864 Boechera stricta
Bostr.18351s0175 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 1612377-1612876 Boechera stricta
Bostr.18351s0175 1.0kb upstream 1.0kb upstream 5988 true Scaffold18351: 1612877-1618864 Boechera stricta
Bostr.18351s0175 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 1617865-1618864 Boechera stricta
Bostr.18351s0175 1.0kb downstream 1.0kb downstream 5988 true Scaffold18351: 1611877-1617864 Boechera stricta
Bostr.18351s0175 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 1611877-1612876 Boechera stricta
Bostr.18351s0175 2.0kb upstream 2.0kb upstream 6988 true Scaffold18351: 1612877-1619864 Boechera stricta
Bostr.18351s0175 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 1617865-1619864 Boechera stricta
Bostr.18351s0175 2.0kb downstream 2.0kb downstream 6988 true Scaffold18351: 1610877-1617864 Boechera stricta
Bostr.18351s0175 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 1610877-1612876 Boechera stricta
Bostr.18351s0175 5.0kb upstream 5.0kb upstream 9988 true Scaffold18351: 1612877-1622864 Boechera stricta
Bostr.18351s0175 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 1617865-1622864 Boechera stricta
Bostr.18351s0175 5.0kb downstream 5.0kb downstream 9988 true Scaffold18351: 1607877-1617864 Boechera stricta
Bostr.18351s0175 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 1607877-1612876 Boechera stricta
Bostr.18351s0175 10.0kb upstream 10.0kb upstream 14988 true Scaffold18351: 1612877-1627864 Boechera stricta
Bostr.18351s0175 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 1617865-1627864 Boechera stricta
Bostr.18351s0175 10.0kb downstream 10.0kb downstream 14988 true Scaffold18351: 1602877-1617864 Boechera stricta
Bostr.18351s0175 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 1602877-1612876 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379289 5261 Brassicaceae View MSA
123802190 5264 Brassicales-Malvales View MSA
124299404 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain