Gene : Bostr.18351s0224 B. stricta v1.2
Defline:  (1 of 2) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  224
Name:  ? Bostr.18351s0224 Secondary Identifier:  ? PAC:30676763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYSTSYN-PWY Boechera stricta pathologic  
Bstricta PWY-6936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0224 0.5kb upstream 0.5kb upstream 3084 true Scaffold18351: 1926215-1929298 Boechera stricta
Bostr.18351s0224 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 1928799-1929298 Boechera stricta
Bostr.18351s0224 0.5kb downstream 0.5kb downstream 3084 true Scaffold18351: 1925715-1928798 Boechera stricta
Bostr.18351s0224 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 1925715-1926214 Boechera stricta
Bostr.18351s0224 1.0kb upstream 1.0kb upstream 3584 true Scaffold18351: 1926215-1929798 Boechera stricta
Bostr.18351s0224 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 1928799-1929798 Boechera stricta
Bostr.18351s0224 1.0kb downstream 1.0kb downstream 3584 true Scaffold18351: 1925215-1928798 Boechera stricta
Bostr.18351s0224 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 1925215-1926214 Boechera stricta
Bostr.18351s0224 2.0kb upstream 2.0kb upstream 4584 true Scaffold18351: 1926215-1930798 Boechera stricta
Bostr.18351s0224 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 1928799-1930798 Boechera stricta
Bostr.18351s0224 2.0kb downstream 2.0kb downstream 4584 true Scaffold18351: 1924215-1928798 Boechera stricta
Bostr.18351s0224 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 1924215-1926214 Boechera stricta
Bostr.18351s0224 5.0kb upstream 5.0kb upstream 7584 true Scaffold18351: 1926215-1933798 Boechera stricta
Bostr.18351s0224 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 1928799-1933798 Boechera stricta
Bostr.18351s0224 5.0kb downstream 5.0kb downstream 7584 true Scaffold18351: 1921215-1928798 Boechera stricta
Bostr.18351s0224 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 1921215-1926214 Boechera stricta
Bostr.18351s0224 10.0kb upstream 10.0kb upstream 12584 true Scaffold18351: 1926215-1938798 Boechera stricta
Bostr.18351s0224 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 1928799-1938798 Boechera stricta
Bostr.18351s0224 10.0kb downstream 10.0kb downstream 12584 true Scaffold18351: 1916215-1928798 Boechera stricta
Bostr.18351s0224 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 1916215-1926214 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363460 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain