Gene : Bostr.18351s0030 B. stricta v1.2
Defline:  (1 of 1) PF01936//PF12872 - NYN domain (NYN) // OST-HTH/LOTUS domain (OST-HTH) Genomic Order:  30
Name:  ? Bostr.18351s0030 Secondary Identifier:  ? PAC:30676494
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18351s0030 0.5kb upstream 0.5kb upstream 3024 true Scaffold18351: 342034-345057 Boechera stricta
Bostr.18351s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold18351: 344558-345057 Boechera stricta
Bostr.18351s0030 0.5kb downstream 0.5kb downstream 3024 true Scaffold18351: 341534-344557 Boechera stricta
Bostr.18351s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold18351: 341534-342033 Boechera stricta
Bostr.18351s0030 1.0kb upstream 1.0kb upstream 3524 true Scaffold18351: 342034-345557 Boechera stricta
Bostr.18351s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold18351: 344558-345557 Boechera stricta
Bostr.18351s0030 1.0kb downstream 1.0kb downstream 3524 true Scaffold18351: 341034-344557 Boechera stricta
Bostr.18351s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold18351: 341034-342033 Boechera stricta
Bostr.18351s0030 2.0kb upstream 2.0kb upstream 4524 true Scaffold18351: 342034-346557 Boechera stricta
Bostr.18351s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold18351: 344558-346557 Boechera stricta
Bostr.18351s0030 2.0kb downstream 2.0kb downstream 4524 true Scaffold18351: 340034-344557 Boechera stricta
Bostr.18351s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold18351: 340034-342033 Boechera stricta
Bostr.18351s0030 5.0kb upstream 5.0kb upstream 7524 true Scaffold18351: 342034-349557 Boechera stricta
Bostr.18351s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold18351: 344558-349557 Boechera stricta
Bostr.18351s0030 5.0kb downstream 5.0kb downstream 7524 true Scaffold18351: 337034-344557 Boechera stricta
Bostr.18351s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold18351: 337034-342033 Boechera stricta
Bostr.18351s0030 10.0kb upstream 10.0kb upstream 12524 true Scaffold18351: 342034-354557 Boechera stricta
Bostr.18351s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold18351: 344558-354557 Boechera stricta
Bostr.18351s0030 10.0kb downstream 10.0kb downstream 12524 true Scaffold18351: 332034-344557 Boechera stricta
Bostr.18351s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold18351: 332034-342033 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375378 5261 Brassicaceae View MSA
123835777 5264 Brassicales-Malvales View MSA
124340318 5266 SBM View MSA
124243670 5268 Malvidae View MSA
124060923 5270 Rosid View MSA
123747384 5271 Pentapetalae View MSA
122791498 5272 Eudicot View MSA
122044167 5273 Angiosperm View MSA
121346389 5274 Embryophyte View MSA
123380376 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain