Gene : Bostr.19424s0411 B. stricta v1.2
Defline:  (1 of 3) PTHR23133 - IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 Genomic Order:  411
Name:  ? Bostr.19424s0411 Secondary Identifier:  ? PAC:30661512
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta HISTSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0411 0.5kb upstream 0.5kb upstream 2700 true Scaffold19424: 3714754-3717453 Boechera stricta
Bostr.19424s0411 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 3716954-3717453 Boechera stricta
Bostr.19424s0411 0.5kb downstream 0.5kb downstream 2700 true Scaffold19424: 3714254-3716953 Boechera stricta
Bostr.19424s0411 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 3714254-3714753 Boechera stricta
Bostr.19424s0411 1.0kb upstream 1.0kb upstream 3200 true Scaffold19424: 3714754-3717953 Boechera stricta
Bostr.19424s0411 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 3716954-3717953 Boechera stricta
Bostr.19424s0411 1.0kb downstream 1.0kb downstream 3200 true Scaffold19424: 3713754-3716953 Boechera stricta
Bostr.19424s0411 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 3713754-3714753 Boechera stricta
Bostr.19424s0411 2.0kb upstream 2.0kb upstream 4200 true Scaffold19424: 3714754-3718953 Boechera stricta
Bostr.19424s0411 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 3716954-3718953 Boechera stricta
Bostr.19424s0411 2.0kb downstream 2.0kb downstream 4200 true Scaffold19424: 3712754-3716953 Boechera stricta
Bostr.19424s0411 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 3712754-3714753 Boechera stricta
Bostr.19424s0411 5.0kb upstream 5.0kb upstream 7200 true Scaffold19424: 3714754-3721953 Boechera stricta
Bostr.19424s0411 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 3716954-3721953 Boechera stricta
Bostr.19424s0411 5.0kb downstream 5.0kb downstream 7200 true Scaffold19424: 3709754-3716953 Boechera stricta
Bostr.19424s0411 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 3709754-3714753 Boechera stricta
Bostr.19424s0411 10.0kb upstream 10.0kb upstream 12200 true Scaffold19424: 3714754-3726953 Boechera stricta
Bostr.19424s0411 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 3716954-3726953 Boechera stricta
Bostr.19424s0411 10.0kb downstream 10.0kb downstream 12200 true Scaffold19424: 3704754-3716953 Boechera stricta
Bostr.19424s0411 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 3704754-3714753 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378389 5261 Brassicaceae View MSA
123833237 5264 Brassicales-Malvales View MSA
124344750 5266 SBM View MSA
124241761 5268 Malvidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain