Gene : Bostr.19424s0425 B. stricta v1.2
Defline:  (1 of 1) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  425
Name:  ? Bostr.19424s0425 Secondary Identifier:  ? PAC:30661576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1269 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0425 0.5kb upstream 0.5kb upstream 7998 true Scaffold19424: 3839382-3847379 Boechera stricta
Bostr.19424s0425 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 3846880-3847379 Boechera stricta
Bostr.19424s0425 0.5kb downstream 0.5kb downstream 7998 true Scaffold19424: 3838882-3846879 Boechera stricta
Bostr.19424s0425 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 3838882-3839381 Boechera stricta
Bostr.19424s0425 1.0kb upstream 1.0kb upstream 8498 true Scaffold19424: 3839382-3847879 Boechera stricta
Bostr.19424s0425 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 3846880-3847879 Boechera stricta
Bostr.19424s0425 1.0kb downstream 1.0kb downstream 8498 true Scaffold19424: 3838382-3846879 Boechera stricta
Bostr.19424s0425 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 3838382-3839381 Boechera stricta
Bostr.19424s0425 2.0kb upstream 2.0kb upstream 9498 true Scaffold19424: 3839382-3848879 Boechera stricta
Bostr.19424s0425 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 3846880-3848879 Boechera stricta
Bostr.19424s0425 2.0kb downstream 2.0kb downstream 9498 true Scaffold19424: 3837382-3846879 Boechera stricta
Bostr.19424s0425 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 3837382-3839381 Boechera stricta
Bostr.19424s0425 5.0kb upstream 5.0kb upstream 12498 true Scaffold19424: 3839382-3851879 Boechera stricta
Bostr.19424s0425 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 3846880-3851879 Boechera stricta
Bostr.19424s0425 5.0kb downstream 5.0kb downstream 12498 true Scaffold19424: 3834382-3846879 Boechera stricta
Bostr.19424s0425 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 3834382-3839381 Boechera stricta
Bostr.19424s0425 10.0kb upstream 10.0kb upstream 17498 true Scaffold19424: 3839382-3856879 Boechera stricta
Bostr.19424s0425 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 3846880-3856879 Boechera stricta
Bostr.19424s0425 10.0kb downstream 10.0kb downstream 17498 true Scaffold19424: 3829382-3846879 Boechera stricta
Bostr.19424s0425 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 3829382-3839381 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122340231 5261 Brassicaceae Singleton cluster - no MSA
123780678 5264 Brassicales-Malvales Singleton cluster - no MSA
124350596 5266 SBM View MSA
124238652 5268 Malvidae View MSA
124065763 5270 Rosid View MSA
123738105 5271 Pentapetalae View MSA
122788846 5272 Eudicot View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain