Gene : Bostr.19424s0448 B. stricta v1.2

Defline:  (1 of 2) PTHR11599:SF13 - PROTEASOME SUBUNIT ALPHA TYPE-4 Genomic Order:  448
Name:  ? Bostr.19424s0448 Secondary Identifier:  ? PAC:30661540

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0448 0.5kb upstream 0.5kb upstream 2458 true Scaffold19424: 3994380-3996837 Boechera stricta
Bostr.19424s0448 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 3994380-3994879 Boechera stricta
Bostr.19424s0448 0.5kb downstream 0.5kb downstream 2458 true Scaffold19424: 3994880-3997337 Boechera stricta
Bostr.19424s0448 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 3996838-3997337 Boechera stricta
Bostr.19424s0448 1.0kb upstream 1.0kb upstream 2958 true Scaffold19424: 3993880-3996837 Boechera stricta
Bostr.19424s0448 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 3993880-3994879 Boechera stricta
Bostr.19424s0448 1.0kb downstream 1.0kb downstream 2958 true Scaffold19424: 3994880-3997837 Boechera stricta
Bostr.19424s0448 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 3996838-3997837 Boechera stricta
Bostr.19424s0448 2.0kb upstream 2.0kb upstream 3958 true Scaffold19424: 3992880-3996837 Boechera stricta
Bostr.19424s0448 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 3992880-3994879 Boechera stricta
Bostr.19424s0448 2.0kb downstream 2.0kb downstream 3958 true Scaffold19424: 3994880-3998837 Boechera stricta
Bostr.19424s0448 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 3996838-3998837 Boechera stricta
Bostr.19424s0448 5.0kb upstream 5.0kb upstream 6958 true Scaffold19424: 3989880-3996837 Boechera stricta
Bostr.19424s0448 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 3989880-3994879 Boechera stricta
Bostr.19424s0448 5.0kb downstream 5.0kb downstream 6958 true Scaffold19424: 3994880-4001837 Boechera stricta
Bostr.19424s0448 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 3996838-4001837 Boechera stricta
Bostr.19424s0448 10.0kb upstream 10.0kb upstream 11958 true Scaffold19424: 3984880-3996837 Boechera stricta
Bostr.19424s0448 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 3984880-3994879 Boechera stricta
Bostr.19424s0448 10.0kb downstream 10.0kb downstream 11958 true Scaffold19424: 3994880-4006837 Boechera stricta
Bostr.19424s0448 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 3996838-4006837 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378710 5261 Brassicaceae View MSA
123836342 5264 Brassicales-Malvales View MSA
124339595 5266 SBM View MSA
124237536 5268 Malvidae View MSA
124065392 5270 Rosid View MSA
123752544 5271 Pentapetalae View MSA
122786754 5272 Eudicot View MSA
122049144 5273 Angiosperm View MSA
121351432 5274 Embryophyte View MSA
123426590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain