Gene : Bostr.19424s0259 B. stricta v1.2
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  259
Name:  ? Bostr.19424s0259 Secondary Identifier:  ? PAC:30661410
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6622 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0259 0.5kb upstream 0.5kb upstream 7401 true Scaffold19424: 2442399-2449799 Boechera stricta
Bostr.19424s0259 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 2449300-2449799 Boechera stricta
Bostr.19424s0259 0.5kb downstream 0.5kb downstream 7401 true Scaffold19424: 2441899-2449299 Boechera stricta
Bostr.19424s0259 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 2441899-2442398 Boechera stricta
Bostr.19424s0259 1.0kb upstream 1.0kb upstream 7901 true Scaffold19424: 2442399-2450299 Boechera stricta
Bostr.19424s0259 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 2449300-2450299 Boechera stricta
Bostr.19424s0259 1.0kb downstream 1.0kb downstream 7901 true Scaffold19424: 2441399-2449299 Boechera stricta
Bostr.19424s0259 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 2441399-2442398 Boechera stricta
Bostr.19424s0259 2.0kb upstream 2.0kb upstream 8901 true Scaffold19424: 2442399-2451299 Boechera stricta
Bostr.19424s0259 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 2449300-2451299 Boechera stricta
Bostr.19424s0259 2.0kb downstream 2.0kb downstream 8901 true Scaffold19424: 2440399-2449299 Boechera stricta
Bostr.19424s0259 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 2440399-2442398 Boechera stricta
Bostr.19424s0259 5.0kb upstream 5.0kb upstream 11901 true Scaffold19424: 2442399-2454299 Boechera stricta
Bostr.19424s0259 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 2449300-2454299 Boechera stricta
Bostr.19424s0259 5.0kb downstream 5.0kb downstream 11901 true Scaffold19424: 2437399-2449299 Boechera stricta
Bostr.19424s0259 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 2437399-2442398 Boechera stricta
Bostr.19424s0259 10.0kb upstream 10.0kb upstream 16901 true Scaffold19424: 2442399-2459299 Boechera stricta
Bostr.19424s0259 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 2449300-2459299 Boechera stricta
Bostr.19424s0259 10.0kb downstream 10.0kb downstream 16901 true Scaffold19424: 2432399-2449299 Boechera stricta
Bostr.19424s0259 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 2432399-2442398 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372765 5261 Brassicaceae View MSA
123834953 5264 Brassicales-Malvales View MSA
124346454 5266 SBM View MSA
124243383 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain