Gene : Bostr.19424s0155 B. stricta v1.2

Defline:  (1 of 1) PTHR34282:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MSD24 Genomic Order:  155
Name:  ? Bostr.19424s0155 Secondary Identifier:  ? PAC:30661016

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0155 0.5kb upstream 0.5kb upstream 3566 true Scaffold19424: 1479398-1482963 Boechera stricta
Bostr.19424s0155 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 1482464-1482963 Boechera stricta
Bostr.19424s0155 0.5kb downstream 0.5kb downstream 3566 true Scaffold19424: 1478898-1482463 Boechera stricta
Bostr.19424s0155 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 1478898-1479397 Boechera stricta
Bostr.19424s0155 1.0kb upstream 1.0kb upstream 4066 true Scaffold19424: 1479398-1483463 Boechera stricta
Bostr.19424s0155 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 1482464-1483463 Boechera stricta
Bostr.19424s0155 1.0kb downstream 1.0kb downstream 4066 true Scaffold19424: 1478398-1482463 Boechera stricta
Bostr.19424s0155 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 1478398-1479397 Boechera stricta
Bostr.19424s0155 2.0kb upstream 2.0kb upstream 5066 true Scaffold19424: 1479398-1484463 Boechera stricta
Bostr.19424s0155 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 1482464-1484463 Boechera stricta
Bostr.19424s0155 2.0kb downstream 2.0kb downstream 5066 true Scaffold19424: 1477398-1482463 Boechera stricta
Bostr.19424s0155 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 1477398-1479397 Boechera stricta
Bostr.19424s0155 5.0kb upstream 5.0kb upstream 8066 true Scaffold19424: 1479398-1487463 Boechera stricta
Bostr.19424s0155 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 1482464-1487463 Boechera stricta
Bostr.19424s0155 5.0kb downstream 5.0kb downstream 8066 true Scaffold19424: 1474398-1482463 Boechera stricta
Bostr.19424s0155 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 1474398-1479397 Boechera stricta
Bostr.19424s0155 10.0kb upstream 10.0kb upstream 13066 true Scaffold19424: 1479398-1492463 Boechera stricta
Bostr.19424s0155 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 1482464-1492463 Boechera stricta
Bostr.19424s0155 10.0kb downstream 10.0kb downstream 13066 true Scaffold19424: 1469398-1482463 Boechera stricta
Bostr.19424s0155 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 1469398-1479397 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366057 5261 Brassicaceae View MSA
123837786 5264 Brassicales-Malvales View MSA
124337980 5266 SBM View MSA
124243793 5268 Malvidae View MSA
124062451 5270 Rosid View MSA
123742070 5271 Pentapetalae View MSA
122794561 5272 Eudicot View MSA
122048518 5273 Angiosperm View MSA
121311000 5274 Embryophyte View MSA
123348358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain