Gene : Bostr.19424s0200 B. stricta v1.2
Defline:  (1 of 1) PTHR21000 - DIHYDROXY-ACID DEHYDRATASE DAD Genomic Order:  200
Name:  ? Bostr.19424s0200 Secondary Identifier:  ? PAC:30660806
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta BRANCHED-CHAIN-AA-SYN-PWY Boechera stricta pathologic  
Bstricta ILEUSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  
Bstricta VALSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0200 0.5kb upstream 0.5kb upstream 4415 true Scaffold19424: 1916958-1921372 Boechera stricta
Bostr.19424s0200 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 1916958-1917457 Boechera stricta
Bostr.19424s0200 0.5kb downstream 0.5kb downstream 4415 true Scaffold19424: 1917458-1921872 Boechera stricta
Bostr.19424s0200 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 1921373-1921872 Boechera stricta
Bostr.19424s0200 1.0kb upstream 1.0kb upstream 4915 true Scaffold19424: 1916458-1921372 Boechera stricta
Bostr.19424s0200 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 1916458-1917457 Boechera stricta
Bostr.19424s0200 1.0kb downstream 1.0kb downstream 4915 true Scaffold19424: 1917458-1922372 Boechera stricta
Bostr.19424s0200 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 1921373-1922372 Boechera stricta
Bostr.19424s0200 2.0kb upstream 2.0kb upstream 5915 true Scaffold19424: 1915458-1921372 Boechera stricta
Bostr.19424s0200 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 1915458-1917457 Boechera stricta
Bostr.19424s0200 2.0kb downstream 2.0kb downstream 5915 true Scaffold19424: 1917458-1923372 Boechera stricta
Bostr.19424s0200 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 1921373-1923372 Boechera stricta
Bostr.19424s0200 5.0kb upstream 5.0kb upstream 8915 true Scaffold19424: 1912458-1921372 Boechera stricta
Bostr.19424s0200 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 1912458-1917457 Boechera stricta
Bostr.19424s0200 5.0kb downstream 5.0kb downstream 8915 true Scaffold19424: 1917458-1926372 Boechera stricta
Bostr.19424s0200 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 1921373-1926372 Boechera stricta
Bostr.19424s0200 10.0kb upstream 10.0kb upstream 13915 true Scaffold19424: 1907458-1921372 Boechera stricta
Bostr.19424s0200 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 1907458-1917457 Boechera stricta
Bostr.19424s0200 10.0kb downstream 10.0kb downstream 13915 true Scaffold19424: 1917458-1931372 Boechera stricta
Bostr.19424s0200 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 1921373-1931372 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373960 5261 Brassicaceae View MSA
123828725 5264 Brassicales-Malvales View MSA
124341291 5266 SBM View MSA
124241984 5268 Malvidae View MSA
124066376 5270 Rosid View MSA
123742145 5271 Pentapetalae View MSA
122787783 5272 Eudicot View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain