Gene : Bostr.19424s0034 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.3 - Threonine--tRNA ligase / Threonyl-tRNA synthetase Genomic Order:  34
Name:  ? Bostr.19424s0034 Secondary Identifier:  ? PAC:30661162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0034 0.5kb upstream 0.5kb upstream 3774 true Scaffold19424: 317133-320906 Boechera stricta
Bostr.19424s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 317133-317632 Boechera stricta
Bostr.19424s0034 0.5kb downstream 0.5kb downstream 3774 true Scaffold19424: 317633-321406 Boechera stricta
Bostr.19424s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 320907-321406 Boechera stricta
Bostr.19424s0034 1.0kb upstream 1.0kb upstream 4274 true Scaffold19424: 316633-320906 Boechera stricta
Bostr.19424s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 316633-317632 Boechera stricta
Bostr.19424s0034 1.0kb downstream 1.0kb downstream 4274 true Scaffold19424: 317633-321906 Boechera stricta
Bostr.19424s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 320907-321906 Boechera stricta
Bostr.19424s0034 2.0kb upstream 2.0kb upstream 5274 true Scaffold19424: 315633-320906 Boechera stricta
Bostr.19424s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 315633-317632 Boechera stricta
Bostr.19424s0034 2.0kb downstream 2.0kb downstream 5274 true Scaffold19424: 317633-322906 Boechera stricta
Bostr.19424s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 320907-322906 Boechera stricta
Bostr.19424s0034 5.0kb upstream 5.0kb upstream 8274 true Scaffold19424: 312633-320906 Boechera stricta
Bostr.19424s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 312633-317632 Boechera stricta
Bostr.19424s0034 5.0kb downstream 5.0kb downstream 8274 true Scaffold19424: 317633-325906 Boechera stricta
Bostr.19424s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 320907-325906 Boechera stricta
Bostr.19424s0034 10.0kb upstream 10.0kb upstream 13274 true Scaffold19424: 307633-320906 Boechera stricta
Bostr.19424s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 307633-317632 Boechera stricta
Bostr.19424s0034 10.0kb downstream 10.0kb downstream 13274 true Scaffold19424: 317633-330906 Boechera stricta
Bostr.19424s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 320907-330906 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374225 5261 Brassicaceae View MSA
123831933 5264 Brassicales-Malvales View MSA
124337778 5266 SBM View MSA
124251834 5268 Malvidae View MSA
124062778 5270 Rosid View MSA
123739350 5271 Pentapetalae View MSA
122793542 5272 Eudicot View MSA
122044606 5273 Angiosperm View MSA
121343894 5274 Embryophyte View MSA
123425201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain