Gene : Bostr.19046s0060 B. stricta v1.2
Defline:  (1 of 2) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  60
Name:  ? Bostr.19046s0060 Secondary Identifier:  ? PAC:30653721
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19046s0060 0.5kb upstream 0.5kb upstream 3659 true Scaffold19046: 248697-252355 Boechera stricta
Bostr.19046s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold19046: 248697-249196 Boechera stricta
Bostr.19046s0060 0.5kb downstream 0.5kb downstream 3659 true Scaffold19046: 249197-252855 Boechera stricta
Bostr.19046s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold19046: 252356-252855 Boechera stricta
Bostr.19046s0060 1.0kb upstream 1.0kb upstream 4159 true Scaffold19046: 248197-252355 Boechera stricta
Bostr.19046s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold19046: 248197-249196 Boechera stricta
Bostr.19046s0060 1.0kb downstream 1.0kb downstream 4159 true Scaffold19046: 249197-253355 Boechera stricta
Bostr.19046s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold19046: 252356-253355 Boechera stricta
Bostr.19046s0060 2.0kb upstream 2.0kb upstream 5159 true Scaffold19046: 247197-252355 Boechera stricta
Bostr.19046s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold19046: 247197-249196 Boechera stricta
Bostr.19046s0060 2.0kb downstream 2.0kb downstream 5159 true Scaffold19046: 249197-254355 Boechera stricta
Bostr.19046s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold19046: 252356-254355 Boechera stricta
Bostr.19046s0060 5.0kb upstream 5.0kb upstream 8159 true Scaffold19046: 244197-252355 Boechera stricta
Bostr.19046s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold19046: 244197-249196 Boechera stricta
Bostr.19046s0060 5.0kb downstream 5.0kb downstream 8159 true Scaffold19046: 249197-257355 Boechera stricta
Bostr.19046s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold19046: 252356-257355 Boechera stricta
Bostr.19046s0060 10.0kb upstream 10.0kb upstream 13159 true Scaffold19046: 239197-252355 Boechera stricta
Bostr.19046s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold19046: 239197-249196 Boechera stricta
Bostr.19046s0060 10.0kb downstream 10.0kb downstream 13159 true Scaffold19046: 249197-262355 Boechera stricta
Bostr.19046s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold19046: 252356-262355 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381591 5261 Brassicaceae View MSA
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain