Gene : Bostr.18473s0390 B. stricta v1.2
Defline:  (1 of 1) PTHR10909:SF332 - ISOVALERYL-COA DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  390
Name:  ? Bostr.18473s0390 Secondary Identifier:  ? PAC:30666838
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LEU-DEG2-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0390 0.5kb upstream 0.5kb upstream 4341 true Scaffold18473: 2141155-2145495 Boechera stricta
Bostr.18473s0390 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 2141155-2141654 Boechera stricta
Bostr.18473s0390 0.5kb downstream 0.5kb downstream 4341 true Scaffold18473: 2141655-2145995 Boechera stricta
Bostr.18473s0390 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 2145496-2145995 Boechera stricta
Bostr.18473s0390 1.0kb upstream 1.0kb upstream 4841 true Scaffold18473: 2140655-2145495 Boechera stricta
Bostr.18473s0390 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 2140655-2141654 Boechera stricta
Bostr.18473s0390 1.0kb downstream 1.0kb downstream 4841 true Scaffold18473: 2141655-2146495 Boechera stricta
Bostr.18473s0390 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 2145496-2146495 Boechera stricta
Bostr.18473s0390 2.0kb upstream 2.0kb upstream 5841 true Scaffold18473: 2139655-2145495 Boechera stricta
Bostr.18473s0390 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 2139655-2141654 Boechera stricta
Bostr.18473s0390 2.0kb downstream 2.0kb downstream 5841 true Scaffold18473: 2141655-2147495 Boechera stricta
Bostr.18473s0390 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 2145496-2147495 Boechera stricta
Bostr.18473s0390 5.0kb upstream 5.0kb upstream 8841 true Scaffold18473: 2136655-2145495 Boechera stricta
Bostr.18473s0390 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 2136655-2141654 Boechera stricta
Bostr.18473s0390 5.0kb downstream 5.0kb downstream 8841 true Scaffold18473: 2141655-2150495 Boechera stricta
Bostr.18473s0390 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 2145496-2150495 Boechera stricta
Bostr.18473s0390 10.0kb upstream 10.0kb upstream 13841 true Scaffold18473: 2131655-2145495 Boechera stricta
Bostr.18473s0390 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 2131655-2141654 Boechera stricta
Bostr.18473s0390 10.0kb downstream 10.0kb downstream 13841 true Scaffold18473: 2141655-2155495 Boechera stricta
Bostr.18473s0390 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 2145496-2155495 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365670 5261 Brassicaceae View MSA
123831930 5264 Brassicales-Malvales View MSA
124345831 5266 SBM View MSA
124243449 5268 Malvidae View MSA
124064222 5270 Rosid View MSA
123745101 5271 Pentapetalae View MSA
122788646 5272 Eudicot View MSA
122042062 5273 Angiosperm View MSA
121346887 5274 Embryophyte View MSA
123427095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain